Menu
- Présentation
- Equipes de recherche
- Production
- Logiciels et bases de données
- Animations scientifiques
- Enseignement
- Stages
- Pôles techniques
- Sécurité
- Liens
- PRABI
- Projets en cours
Rechercher
Equipe Ecologie Quantitative et Evolutive des Communautés
Nos activités de recherche, centrées sur les interactions interspécifiques (écologie des communautés) visent à mieux comprendre les processus écologiques et évolutifs structurant les assemblages d’espèces et la biodiversité à différentes échelles temporelles et spatiales. En travaillant sur des modèles biologiques contrastés (e.g., grands mammifères africains, insectes, microbes, plantes), notre équipe présente l’originalité d’aborder ces questions majeures tant en recherche fondamentale qu’appliquée sous 3 angles complémentaires :
- Nos travaux sont fortement ancrés dans le cadre conceptuel de la biologie évolutive en étudiant (i) la diversité (ou la similarité) des réponses adaptatives mise en œuvre par les organismes face aux pressions sélectives de leur environnement, (ii) leurs conséquences sur la démographie des populations et à terme (iii) la dynamique et la composition des communautés d’espèces.
- Notre recherche est étroitement liée à des problématiques sociétales de conservation et de gestion de la biodiversité en intégrant à la fois le fonctionnement des systèmes socio-écologiques et le contexte du changement climatique. Nous menons des études expérimentales, gérons et assurons le suivis à long terme de plusieurs réseaux d’observations de communautés et nous gérons la zone atelier CNRS de Hwange.
- Nos travaux fortement ancrés dans des problématiques méthodologiques, visent à développer des nouveaux outils de traitement statistique et de modélisation de données écologiques. Cette activité conduit à l’élaboration de méthodes et logiciels que nous développons et distribuons librement.
L’équipe EQEC est composée de sept membres permanents dont les projets de recherche s’inscrivent majoritairement dans les trois axes suivants :
Fonctionnement des communautés des savanes africaines
Le programme de recherches interdisciplinaires à long terme mené dans la Zone Atelier Hwange, au Zimbabwe, s’intéresse au fonctionnement des communautés animales et végétales au sein du parc national de Hwange et aux interactions entre cette aire protégée et les humains vivant à sa périphérie.
Les recherches s’articulent autour de trois grands axes :
Comportement et dynamique de la population d’éléphants, ainsi que leurs effets et ceux de leur gestion sur le fonctionnement des mares, de la végétation, de la biodiversité, des autres grands mammifères, et la coexistence humains-éléphants.
Interactions au sein et entre niveaux trophiques et étude du rôle de l’hétérogénéité spatiale des ressources, des risques et des perturbations dans le fonctionnement des communautés et de l’écosystème, avec deux grandes sources de modifications : les actions de gestion (e.g. chasse sportive, gestion de l’eau) et le changement climatique.
Ecologie humaine et mécanismes de coexistence humains-faune sauvage afin de comprendre le fonctionnement de l’interface conservation-développement pour une conservation intégrée et la promotion du bon fonctionnement du socio-écosystème.
Contact : Hervé Fritz, Marion Valeix
Masting et dynamique des communautés de consommateurs de fruits
Le masting est une stratégie de reproduction souvent rencontrée chez les plantes pérennes, caractérisée par des fructifications hautement fluctuantes dans le temps et synchronisées à l’échelle de la population. Les fructifications constituent une ressource pulsée susceptible d’impacter fortement la dynamique écologique et évolutive des communautés des consommateurs de fruits. Ces systèmes constituent alors des modèles de choix pour étudier la dynamique de la biodiversité en environnement fluctuant.
Le système que nous étudions est formé par les chênes (emblématiques du masting) et quatre espèces d’insectes proches phylogénétiquement (Coléoptères curculionidés, Curculio sp.) en compétition pour l’exploitation des glands qui constituent le siège du développement larvaire. En combinant des suivis sur le terrain (réseau de 16 sites répartis sur l’ensemble de la France métropolitaine) et le développement de modèles théoriques, nos questions s’articulent autour de 3 axes visant à mieux comprendre (i) les causes proximales du masting, (ii) les mécanismes qui sous-tendent la coexistence d’espèces en compétition pour une ressource hautement fluctuante et (iii) la coévolution des stratégies d’exploitation de la ressource fluctuante dans les communautés d’insectes et des stratégies de fructification des chênes.
Contact : Marie-Claude Venner, Samuel Venner
Analyse statistique de données écologiques
L’étude de la structure et de la dynamique des assemblages d’espèces et la compréhension des processus qui en sont à l’origine nécessite la collecte de données dont la nature se complexifie avec les développements technologiques pour leur acquisition (e.g. suivi individuel par GPS, mesures d’interactions par logger, données spatiales issues d’imagerie satellite, données moléculaires). Cette masse importante de données se stocke naturellement sous la forme de tableaux de données dont les caractéristiques sont très variées : type de variables (e.g., quantitatif, qualitatif, ordinal, flou), contraintes sur les individus ou les variables (e.g., spatiale, phylogénétique, hiérarchique).
Notre activité vise à développer de nouveaux outils méthodologiques permettant l’analyse de ces données afin de répondre aux questions posées par les écologues. Nous nous intéressons plus particulièrement aux méthodes d’analyse multivariée et aux problématiques associées à l’analyse de structures spatiales, la prise en compte d’information sur les espèces (traits fonctionnels, morphologie, phylogénie), la variation spatio-temporelle des relations espèces-environnement ou la variabilité de la perception de la relation hommes-aires protégées. Nous développons aussi des méthodes d’estimation de paramètres de modèles biologiques adaptées à des problématiques non classiques (modèles non linéaires, non gaussiens, avec variables latentes, données censurées…) et des approches bayésiennes hiérarchiques pour modéliser la variabilité biologique dans ces modèles.
Les innovations méthodologiques sont mises à disposition de la communauté scientifique à travers le développement, la distribution et la maintenance de logiciels (librairies pour le langage R : ade4, adegraphics, adephylo, ade4TkGUI, nlstools, fitdistrplus, etc.).
Contact : Marie Laure Delignette-Muller, Stéphane Dray, Anne-Béatrice Dufour, Jean Thioulouse
Membres
Responsable : | Venner Marie-Claude MCU UCBL |
- Bernard Alice doctorant UCBL
- Delignette-Muller Marie-Laure PU VetAgro-Sup
- Dray Stéphane DR CNRS
- Dufour Anne-Béatrice MCU UCBL
- Fleurot Emilie doctorant CNRS
- Keurinck Léa M2 UCBL
- Lacomme Laura doctorant UCBL
- Lobry Jean PU UCBL
- Morin Aissa doctorant UCBL
- Nicvert Lisa doctorant UCBL
- Pédarros Elie doctorant CNRS
- Say-Sallaz Elise doctorant UCBL
- Thioulouse Jean DR CNRS
- Valeix Marion CR CNRS
- Venner Samuel MCU UCBL
+Publications -Publications
Courbin N, Loveridge AJ, Fritz H, Macdonald DW, Patin R, Valeix M, Chamaillé-Jammes S (2019)
Zebra diel migrations reduce encounter risk with lions at night, Journal of animal ecology, vol. 88 pp.92-101.
Crabot J, Clappe S, Dray S, Datry T, McCrea R (2019)
Testing the Mantel statistic with a spatially‐constrained permutation procedure, Methods in Ecology and Evolution, vol. 10 pp.532-540.
Genestet C, Hodille E, Westeel E, Ginevra C, Ader F, Venner S, Lina G, Bryant JE, Berland JL, Dumitrescu O (2019)
Subcultured Mycobacterium tuberculosis isolates on different growth media are fully representative of bacteria within clinical samples, Tuberculosis, vol. 116 pp.61-66.
Lerat E, Goubert C, Guirao-Rico S, Merenciano M, Dufour AB, Vieira C, Gonzalez J (2019)
Population-specific dynamics and selection patterns of transposable element insertions in European natural populations, Molecular ecology, vol. 28 pp.1506-1522.
Montgomery RA, Moll RJ, Say-Sallaz E, Valeix M, Prugh LR (2019)
A tendency to simplify complex systems, Biological Conservation, vol. 233 pp.1-11.
Ohlmann M, Miele V, Dray S, Chalmandrier L, O`Connor L, Thuiller W (2019)
Diversity indices for ecological networks: a unifying framework using Hill numbers, Ecology letters, vol. 22 pp.737-747.
Say-Sallaz E, Chamaillé-Jammes S, Fritz H, Valeix M (2019)
Non-consumptive effects of predation in large terrestrial mammals: Mapping our knowledge and revealing the tip of the iceberg, Biological Conservation, vol. 235 pp.36-52.
Schermer E, Bel-Venner MC, Fouchet D, Siberchicot A, Boulanger V, Caignard T, Thibaudon M, Oliver G, Nicolas M, Gaillard JM, Delzon S, Venner S (2019)
Pollen limitation as a main driver of fruiting dynamics in oak populations, Ecology letters, vol. 22 pp.98-107.
Slimani N, Sánchez-Fernández D, Guilbert E, Boumaïza M, Guareschi S, Thioulouse J (2019)
Assessing potential surrogates of macroinvertebrate diversity in North-African Mediterranean aquatic ecosystems, Ecological Indicators, vol. 101 pp.324-329.
Bauman D, Drouet T, Dray S, Vleminckx J (2018)
Disentangling good from bad practices in the selection of spatial or phylogenetic eigenvectors, Ecography, vol. 41 pp.1638-1649.
Bauman D, Drouet T, Fortin MJ, Dray S (2018)
Optimizing the choice of a spatial weighting matrix in eigenvector-based methods, Ecology, vol. 99 pp.2159-2166.
Bougeard S, Dray S (2018)
Supervised Multiblock Analysis in R with the ade4 Package, Journal of Statistical Software, vol. 86 pp.1-17.
Braga J, Ter Braak CJ, Thuiller W, Dray S (2018)
Integrating spatial and phylogenetic information in the fourth-corneranalysis to test trait–environment relationships, Ecology, vol. 99 pp.2667-2674.
Clappe S, Dray S, Peres-Neto PR (2018)
Beyond neutrality: disentangling the effects of species sortingand spurious correlations in community analysis, Ecology, vol. 99 pp.1737-1747.
Favreau FR, Goldizen AW, Fritz H, Pays O (2018)
Food supply fluctuations constrain group sizes of kangaroos and in turn shape their vigilance and feeding strategies, Animal Behaviour, vol. 135 pp.165-176.
Girard C, Dufour AB, Charruault AL, Renaud S (2018)
Assessing the composition of fragmented agglutinated foraminiferal assemblages in ancient sediments: comparison of counting and area-based methods in Famennian samples (Late Devonian), Journal of Micropalaeontology, vol. 37 pp.87-95.
Jacquemond I, Muggeo A, Lamblin G, Tristan A, Gillet Y, Bolze PA, Bes M, Gustave CA, Rasigade JP, Golfier F, Ferry T, Dubost A, Abrouk D, Barreto S, Prigent-Combaret C, Thioulouse J, Lina G, Muller D (2018)
Complex ecological interactions of Staphylococcus aureus in tampons during menstruation, Scientific reports, vol. 8 pp.9942-9942.
Kushata JNT, Périquet S, Tarakini T, Muzamba M, Mafuwa B, Loveridge AJ, Macdonald DW, Fritz H, Valeix M (2018)
Drivers of diurnal rest site selection by spotted hyaenas, Journal of Zoology, vol. 304 pp.132-140.
Larras F, Billoir E, Baillard V, Siberchicot A, Scholz S, Wubet T, Tarkka M, Schmitt-Jansen M, Delignette-Muller ML (2018)
DRomics: A Turnkey Tool to Support the Use of the Dose-Response Framework for Omics Data in Ecological Risk Assessment, Environmental science & technology, vol. 52 pp.14461-14468.
![]() | Lobry JR (2018) Multivariate Analyses of Codon Usage Biases, ISTE Press - Elsevier, 2018 |
Lurier T, Delignette-Muller ML, Rannou B, Strube C, Arcangioli MA, Bourgoin G (2018)
Diagnosis of bovine dictyocaulosis by bronchoalveolar lavage technique: A comparative study using a Bayesian approach, Preventive veterinary medicine, vol. 154 pp.124-131.
Nonfoux L, Chiaruzzi M, Badiou C, Baude J, Tristan A, Thioulouse J, Muller D, Prigent-Combaret C, Lina G (2018)
Impact of Currently Marketed Tampons and Menstrual Cups on Staphylococcus aureus Growth and Toxic Shock Syndrome Toxin 1 Production In Vitro, Applied and environmental microbiology, vol. 84 pp.e00351-18.
Renaud PC, De O Roque F, Souza FL, Pays O, Laurent F, Fritz H, Fischer E, Fabricius C (2018)
Towards a Meta-Social-Ecological System Perspective: A Response to Gounand et al, Trends in ecology & evolution, vol. 33 pp.481-482.
Ter Braak CJF, Peres-Neto PR, Dray S (2018)
Simple parametric tests for trait–environment association, Journal of Vegetation Science, vol. 29 pp.801-811.
Ter Braak CJF, Smilauer P, Dray S (2018)
Algorithms and biplots for double constrained correspondence analysis, Environmental and Ecological Statistics, vol. 25 pp.171-197.
Thioulouse J, Dray S, Dufour AB, Siberchicot A, Jombart T, Pavoine S (2018)
Multivariate Analysis of Ecological Data With Ade4, , 2018.
Touzot L, Bel-Venner MC, Gamelon M, Focardi S, Boulanger V, Débias F, Delzon S, Saïd S, Schermer E, Baubet E, Gaillard JM, Venner S (2018)
The ground plot counting method: A valid and reliable assessment tool for quantifying seed production in temperate oak forests?, Forest Ecology and Management, vol. 430 pp.143-149.
Vacchiano G, Ascoli D, Berzaghi F, Lucas-Borja ME, Caignard T, Collalti A, Mairota P, Palaghianu C, Reyer CPO, Sanders TGM, Schermer E, Wohlgemuth T, Hacket-Pain A (2018)
Reproducing reproduction: How to simulate mast seeding in forest models, Ecological Modelling, vol. 376 pp.40-53.
Valls-Fox H, Chamaillé-Jammes S, de Garine-Wichatitsky M, Perrotton A, Courbin N, Miguel E, Guerbois C, Caron A, Loveridge A, Stapelkamp B, Muzamba M, Fritz H (2018)
Water and cattle shape habitat selection by wild herbivores at the edge of a protected area, Animal Conservation, vol. 21 pp.365-375.
Valls-Fox H, De Garine-Wichatitsky M, Fritz H, Chamaillé-Jammes S (2018)
Resource depletion versus landscape complementation: habitat selection by a multiple central place forager, Landscape Ecology, vol. 33 pp.127-140.
Wigh A, Aït-Aïssa S, Creusot N, Terrisse H, Delignette-Muller ML, Bergé A, Vulliet E, Domenjoud B, Gonzalez-Ospina A, Brosselin V, Devaux A, Bony S (2018)
Assessment of Ozone or Not-Treated Wastewater Ecotoxicity Using Mechanism-Based and Zebrafish Embryo Bioassays, Journal of Environmental Protection, vol. 09 pp.325-346.
Wigley BJ, Fritz H, Coetsee C (2018)
Defence strategies in African savanna trees, Oecologia, vol. 187 pp.797-809.
Zidat T, Dufour AB, Meiffrein G, Gabirot M, Comte G, Allainé D (2018)
Anal scent gland secretions inform on sexual maturity sex and social status in the Alpine marmot Marmota marmota (Rodentia: Sciuridae): a role in intrasexual competition in cooperative breeders?, Biological Journal of the Linnean Society, vol. 125 pp.229-239.
Benkhoua N, Hafidi M, Badri W, Baudoin E, Thioulouse J, Prin Y, Galiana A, Ouahmane L, Ouhammou A, Sanguin H, Duponnois R (2017)
Management of the mycorrhizal soil infectivity with Crotalaria ochroleuca an indigenous wild legume in the tropics: Impacts on microbial functional diversity involved in phosphorus mobilization processes in a sahelian soil, Ecological Engineering, vol. 101 pp.130-136.
Blanchard P, Pays O, Fritz H (2017)
Ticks or lions: trading between allogrooming and vigilance in maternal care, Animal Behaviour, vol. 129 pp.269-279.
Caignard T, Kremer A, Firmat C, Nicolas M, Venner S, Delzon S (2017)
Increasing spring temperatures favor oak seed production in temperate areas, Scientific reports, vol. 7 pp.8555-8555.
Charles S, Veber P, Delignette-Muller ML (2017)
MOSAIC: a web-interface for statistical analyses in ecotoxicology, Environmental science and pollution research, vol. 25 pp.11295-11295.
Delignette-Muller ML, Ruiz P, Veber P (2017)
Robust Fit of Toxicokinetic-Toxicodynamic Models Using Prior Knowledge Contained in the Design of Survival Toxicity Tests, Environmental science & technology, vol. 51 pp.4038-4045.
Delignette-Muller ML, Veber P (2017)
Response to Comment on "Robust Fit of Toxicokinetic-Toxicodynamic Models Using Prior Knowledge Contained in the Design of Survival Toxicity Tests", Environmental science & technology, vol. 51 pp.8202-8203.
Du Toit JT, Cross PC, Valeix M (2017)
Managing the Livestock–Wildlife Interface on Rangelands
in: Rangeland Systems. Processes Management and Challenges, Springer, pp.395-425.
Duponnois R, Thioulouse J, Baudoin E, Le Roux C, Galiana A, Prin Y (2017)
Raisonner l’utilisation des légumineuses ligneuses pour réhabiliter des sols dégradés en milieu méditerranéen et tropical, Innovations Agronomiques, vol. 60 pp.125-131.
Fritz H (2017)
Long-term field studies of elephants: understanding the ecology and conservation of a long-lived ecosystem engineer, Journal of Mammalogy, vol. 98 pp.603-611.
Gamelon M, Focardi S, Baubet E, Brandt S, Franzetti B, Ronchi F, Venner S, Saether BE, Gaillard JM (2017)
Reproductive allocation in pulsed-resource environments: a comparative study in two populations of wild boar, Oecologia, vol. 183 pp.1065-1076.
Guerbois C, Fritz H (2017)
Patterns and perceived sustainability of provisioning ecosystem services on the edge of a protected area in times of crisis, Ecosystem Services, vol. 28 pp.196-206.
Loveridge AJ, Valeix M, Elliot NB, Macdonald DW (2017)
The landscape of anthropogenic mortality: how African lions respond to spatial variation in risk, Journal of Applied Ecology, vol. 54 pp.815-825.
Miguel E, Grosbois V, Fritz H, Caron A, De Garine-Wichatitsky M, Nicod F, Loveridge AJ, Stapelkamp B, Macdonald DW, Valeix M (2017)
Drivers of foot-and-mouth disease in cattle at wild/domestic interface: Insights from farmers buffalo and lions, Diversity and Distributions, vol. 23 pp.1018-1030.
Peres-Neto PR, Dray S, Ter Braak CJF (2017)
Linking trait variation to the environment: critical issues with community-weighted mean correlation resolved by the fourth-corner approach, Ecography, vol. 40 pp.806-816.
Schweitzer C, Gaillard T, Guerbois C, Fritz H, Petit O (2017)
Participant Profiling and Pattern of Crop-Foraging in Chacma Baboons (Papio hamadryas ursinus) in Zimbabwe: Why Does Investigating Age–Sex Classes Matter?, International Journal of Primatology, vol. 38 pp.207-223.
Siberchicot A, Julien-Laferrière A, Dufour AB, Thioulouse J, Dray S (2017)
adegraphics: An S4 Lattice-Based Package for the Representation of Multivariate Data, R Journal, vol. 9 pp.198-212.
Slimani N, Guilbert E, Ayni FE, Jrad A, Boumaiza M, Thioulouse J (2017)
The use of STATICO and COSTATIS two exploratory three-ways analysis methods: an application to the ecology of aquatic heteroptera in the Medjerda watershed (Tunisia), Environmental and Ecological Statistics, vol. 24 pp.269-295.
Ter Braak CJ, Peres-Neto P, Dray S (2017)
A critical issue in model-based inference for studying trait-based community assembly and a solution, PeerJ, vol. 5 pp.e2885-e2885.
Trivellone V, Bougeard S, Giavi S, Krebs P, Balseiro D, Dray S, Moretti M (2017)
Factors shaping community assemblages and species co-occurrence of different trophic levels, Ecology and evolution, vol. 7 pp.4745-4754.
Tshipa A, Valls-Fox H, Fritz H, Collins K, Sebele L, Mundy P, Chamaillé-Jammes S (2017)
Partial migration links local surface-water management to large-scale elephant conservation in the world`s largest transfrontier conservation area, Biological Conservation, vol. 215 pp.46-50.
Venner S, Miele V, Terzian C, Biemont C, Daubin V, Feschotte C, Pontier D (2017)
Ecological networks to unravel the routes to horizontal transposon transfers, PLoS Biology, vol. 15 pp.e2001536-e2001536.
Barnier F, Duncan P, Fritz H, Blanchard P, Rubenstein DI, Pays O (2016)
Between-gender differences in vigilance do not necessarily lead to differences in foraging-vigilance tradeoffs, Oecologia, vol. 181 pp.757-68.
Boisseaux P, Delignette-Muller ML, Abbaci K, Thomas H, Garric J (2016)
Analysis of hemocytes in Lymnaea stagnalis: Characterization and effects of repeated hemolymph collections, Fish & shellfish immunology, vol. 57 pp.116-26.
Boisseaux P, Noury P, Delignette-Muller ML, Thomas H, Garric J (2016)
Recommendations for the analysis of hemocyte-related immunocompetent oxidative activity in the freshwater snail Lymnaea stagnalis, Journal of Xenobiotics, vol. 6 pp.25-27.
Brechignac F, Oughton D, Mays C, Barnthouse L, Beasley J C, Bonisoli-Alquati A, Bradshaw C, Brown J, Dray S, Geras`kin S, Glenn T, Higley K, Ishida K, Kapustka L, Kautsky U, Kuhne W, Lynch M, Mappes T, Mihok S, Moller A P, Mothersill C, Mousseau T A, Otaki J M, Pryakhin E, Rhodes O E Jr, Salbu B, Strand P, Tsukada H (2016)
Addressing ecological effects of radiation on populations and ecosystems to improve protection of the environment against radiation: Agreed statements from a Consensus Symposium, Journal of environmental radioactivity, vol. 158-159 pp.21-29.
Chamaille-Jammes S, Charbonnel A, Dray S, Madzikanda H, Fritz H (2016)
Spatial Distribution of a Large Herbivore Community at Waterholes: An Assessment of Its Stability over Years in Hwange National Park Zimbabwe, PLoS One, vol. 11 pp.e0153639-e0153639.
Courbin N, Loveridge AJ, Macdonald DW, Fritz H, Valeix M, Makuwe ET, Chamaillé-Jammes S (2016)
Reactive responses of zebras to lion encounters shape their predator-prey space game at large scale, Oikos, vol. 125 pp.829-838.
Covain R, Fisch-Muller S, Oliveira C, Mol J H, Montoya-Burgos JI, Dray S (2016)
Molecular phylogeny of the highly diversified catfish subfamily Loricariinae (Siluriformes Loricariidae) reveals incongruences with morphological classification, Molecular phylogenetics and evolution, vol. 94 pp.492-517.
Deredjian A, Alliot N, Blanchard L, Brothier E, Anane M, Cambier P, Jolivet C, Khelil MN, Nazaret S, Saby N, Thioulouse J, Favre-Bonte S (2016)
Occurrence of Stenotrophomonas maltophilia in agricultural soils and antibiotic resistance properties, Research in microbiology, vol. 167 pp.313-24.
Diaz S, Kattge J, Cornelissen J H, Wright I J, Lavorel S, Dray S, Reu B, Kleyer M, Wirth C, Prentice I C, Garnier E, Bonisch G, Westoby M, Poorter H, Reich P B, Moles A T, Dickie J, Gillison A N, Zanne A E, Chave J, Wright S J, Sheremet`ev S N, Jactel H, Baraloto C, Cerabolini B, Pierce S, Shipley B, Kirkup D, Casanoves F, Joswig J S, Gunther A, Falczuk V, Ruger N, Mahecha M D, Gorne L D (2016)
The global spectrum of plant form and function, Nature, vol. 529 pp.167-71.
Dray S (2016)
HDR - Environnement traits espace et phylogénie : intégrer des contraintes dans l`analyse d`un tableau écologique .
Ferry N, Dray S, Fritz H, Valeix M (2016)
Interspecific interference competition at the resource patch scale: do large herbivores spatially avoid elephants while accessing water?, Journal of Animal Ecology, vol. 85 pp.1574-1585.
Gayet G, Calenge C, Broyer J, Mesléard F, Vaux V, Fritz H, Guillemain M (2016)
Analysis of Spatial Point Pattern Shows No Desertion of Breeding Mute Swan Areas by the Other Waterbirds Within Fishpond, Acta Ornithologica, vol. 51 pp.151-162.
Loveridge AJ, Valeix M, Chapron G, Davidson Z, Mtare G, Macdonald DW (2016)
Conservation of large predator populations: Demographic and spatial responses of African lions to the intensity of trophy hunting, Biological Conservation, vol. 204 pp.247-254.
Michelland R, Thioulouse J, Kyselkova M, Grundmann GL (2016)
Bacterial Community Structure at the Microscale in Two Different Soils, Microbial ecology, vol. 72 pp.717-724.
Périquet S, Mapendere C, Revilla E, Banda J, Macdonald DW, Loveridge AJ, Fritz H (2016)
A potential role for interference competition with lions in den selection and attendance by spotted hyaenas, Mammalian Biology, vol. 81 pp.227-234.
Venner S, Siberchicot A, Pélisson PF, Schermer E, Bel-Venner MC, Nicolas M, Débias F, Miele V, Sauzet S, Boulanger V, Delzon S (2016)
Fruiting Strategies of Perennial Plants: A Resource Budget Model to Couple Mast Seeding to Pollination Efficiency and Resource Allocation Strategies, American Naturalist, vol. 188 pp.66-75.
Wahbi S, Prin Y, Thioulouse J, Sanguin H, Baudoin E, Maghraoui T, Oufdou K, Le Roux C, Galiana A, Hafidi M, Duponnois R (2016)
Impact of Wheat/Faba Bean Mixed Cropping or Rotation Systems on Soil Microbial Functionalities, Frontiers in Plant Science, vol. 7 pp.1364-1364.
Wigley BJ, Slingsby JA, Díaz S, Bond WJ, Fritz H, Coetsee C, Cornwell W (2016)
Leaf traits of African woody savanna species across climate and soil fertility gradients: evidence for conservative versus acquisitive resource-use strategies, Journal of Ecology, vol. 104 pp.1357-1369.
Baty F, Ritz C, Charles S, Brutsche M, Flandrois JP, Delignette-Muller ML (2015)
A Toolbox for Nonlinear Regression in R: The Package nistools, Journal of Statistical Software, vol. 66 pp.1-21.
Crosmary WG, Chamaillé-Jammes S, Mtare G, Fritz H, Côté SD (2015)
Decline of sable antelope in one of its key conservation areas: the greater Hwange ecosystem Zimbabwe, African Journal of Ecology, vol. 53 pp.194-205.
Delignette-Muller ML, Dutang C (2015)
Fitdistrplus: An R Package for Fitting Distributions, Journal of Statistical Software, vol. 64 pp.1-34.
Dieng A, Baudoin E, Thioulouse J, Brunet D, Toucet J, Sylla SN, Brauman A (2015)
Soil Organic Matter Quality Structure and Activity of the Denitrifiers Community as Influenced by Decaying Mulched Crop Residues, Applied Ecology and Environmental Research, vol. 13 pp.655-675.
Dray S, Josse J (2015)
Principal component analysis with missing values: a comparative survey of methods, Plant Ecology, vol. 216 pp.657-667.
Dray S, Pavoine S, Aguirre de Carcer D (2015)
Considering external information to improve the phylogenetic comparison of microbial communities: a new approach based on constrained Double Principal Coordinates Analysis (cDPCoA), Molecular ecology resources, vol. 15 pp.242-9.
Dujourdy L, Charvoz C, Dalmasso M, Dufour AB (2015)
What a validation strategy means for the quantitation of cocaine and heroin?, Forensic science international, vol. 251 pp.32-39.
Favreau FR, Pays O, Fritz H, Goulard M, Best EC, Goldizen AW (2015)
Predators food and social context shape the types of vigilance exhibited by kangaroos, Animal Behaviour, vol. 99 pp.109-121.
Grange S, Barnier F, Duncan P, Gaillard JM, Valeix M, Ncube H, Périquet S, Fritz H (2015)
Demography of plains zebras (Equus quagga) under heavy predation, Population Ecology, vol. 57 pp.201-214.
Kon Kam King G, Delignette-Muller ML, Kefford BJ, Piscart C, Charles S (2015)
Constructing Time-Resolved Species Sensitivity Distributions Using a Hierarchical Toxico-Dynamic Model, Environmental science & technology, vol. 49 pp.12465-73.
Kon Kam King G, Larras F, Charles S, Delignette-Muller ML (2015)
Hierarchical modelling of species sensitivity distribution: Development and application to the case of diatoms exposed to several herbicides, Ecotoxicology and environmental safety, vol. 114 pp.212-21.
Manaut N, Sanguin H, Ouahmane L, Bressan M, Thioulouse J, Baudoin E, Galiana A, Hafidi M, Prin Y, Duponnois R (2015)
Potentialities of ecological engineering strategy based on native arbuscular mycorrhizal community for improving afforestation programs with carob trees in degraded environments, Ecological Engineering, vol. 79 pp.113-119.
Muratet A, Pellegrini P, Dufour AB, Arrif T, Chiron F (2015)
Perception and knowledge of plant diversity among urban park users, Landscape and Urban Planning, vol. 137 pp.95-106.
Oriol-Cotterill A, Macdonald D W, Valeix M, Ekwanga S, Frank L G (2015)
Spatiotemporal patterns of lion space use in a human-dominated landscape, Animal Behaviour, vol. 101 pp.27-39.
Oriol-Cotterill A, Valeix M, Frank LG, Riginos C, Macdonald DW (2015)
Landscapes of Coexistence for terrestrial carnivores: the ecological consequences of being downgraded from ultimate to penultimate predator by humans, Oikos, vol. 124 pp.1263-1273.
Periquet S, Fritz H, Revilla E (2015)
The Lion King and the Hyaena Queen: large carnivore interactions and coexistence, Biological Reviews, vol. 90 pp.1197-214.
Périquet S, Valeix M, Claypole J, Drouet-Hoguet N, Salnicki J, Mudimba S, Revilla E, Fritz H (2015)
Spotted hyaenas switch their foraging strategy as a response to changes in intraguild interactions with lions, Journal of Zoology, vol. 297 pp.245-254.
Renaud S, Dufour AB, Hardouin A, Ledevin R, Auffray JC (2015)
Once upon Multivariate Analyses: When TheyTell Several Stories about Biological Evolution, PLoS One, vol. 10 pp.e0132801-e0132801.
Rey B, Pelisson PF, Bel-Venner MC, Voituron Y, Venner S (2015)
Revisiting the link between breeding effort and oxidative balance through field evaluation of two sympatric sibling insect species, Evolution, vol. 69 pp.815-22.
Valls Fox H, Bonnet O, Cromsigt JPGM, Fritz H, Shrader AM (2015)
Legacy Effects of Different Land-Use Histories Interact with Current Grazing Patterns to Determine Grazing Lawn Soil Properties, Ecosystems, vol. 18 pp.720-733.
Van der Meer E, Fritz H, Pays O (2015)
Anti-predator behaviour of kudu and impala in response to mimicked African wild dog presence: do age and sex matter?, Behaviour, vol. 152 pp.1209-1228.
Van der Meer E, Rasmussen A, Fritz H (2015)
Using an energetic cost–benefit approach to identify ecological traps: the case of the African wild dog, Animal Conversation, vol. 18 pp.359-366.
Wagner HH, Dray S (2015)
Generating spatially constrained null models for irregularly spaced data using Moran spectral randomization methods, Methods in Ecology and Evolution, vol. 6 pp.1169-1178.
Wahbi S, Prin Y, Maghraoui T, Sanguin H, Thioulouse J, Oufdou K, Hafidi M, Duponnois R (2015)
Field Application of the Mycorrhizal Fungus Rhizophagus irregularis Increases the Yield of Wheat Crop and Affects Soil Microbial Functionalities, American Journal of Plant Sciences, vol. 06 pp.3205-3215.
Barnier F, Valeix M, Duncan P, Chamaille-Jammes S, Barre P, Loveridge A J, Macdonald D W, Fritz H (2014)
Diet quality in a wild grazer declines under the threat of an ambush predator, Proceedings of The Royal Society B-Biological Sciences, vol. 281 pp.20140446-20140446.
Benhamou Si, Valeix M, Chamaillé-Jammes S, Macdonald DW, Loveridge AJ (2014)
Movement-based analysis of interactions in African lions, Animal Behaviour, vol. 90 pp.171-180.
Chamaillé-Jammes S, Valeix M, Madzikanda H, Fritz H (2014)
Surface-water and elephant ecology : lessons from a waterhole-driven ecosystem Hwange National Park Zimbabwe
in: Elephants and Savanna Woodland Ecosystems: A Study from Chobe National Park Botswana, , pp.625-633.
Chemidlin Prevost-Boure N, Dequiedt S, Thioulouse J, Lelievre M, Saby NP, Jolivet C, Arrouays D, Plassart P, Lemanceau P, Ranjard L (2014)
Similar processes but different environmental filters for soil bacterial and fungal community composition turnover on a broad spatial scale, PLoS one, vol. 9 pp.e111667-e111667.
Delignette-Muller ML, Lopes C, Veber P, Charles S (2014)
Statistical handling of reproduction data for exposure-response modeling, Environmental science & technology, vol. 48 pp.7544-51.
Dray S (2014)
Analysing a pair of tables: coinertia analysis and duality diagrams
in: Visualization and Verbalization of Data, , pp.289-300.
Dray S, Choler P, Dolédec S, Peres-Neto PR, Thuillier W, Pavoine S, Braak CJF (2014)
Combining the fourth-corner and the RLQ methods for assessing trait responses to environmental variation, Ecology, vol. 95 pp.14-21.
Ducrot V, Askem C, Azam D, Brettschneider D, Brown R, Charles S, Coke M, Collinet M, Delignette-Muller ML, Forfait-Dubuc C, Holbech H, Hutchinson T, Jach A, Kinnberg K L, Lacoste C, Le Page G, Matthiessen P, Oehlmann J, Rice L, Roberts E, Ruppert K, Davis J E, Veauvy C, Weltje L, Wortham R, Lagadic L (2014)
Development and validation of an OECD reproductive toxicity test guideline with the pond snail Lymnaea stagnalis (Mollusca Gastropoda), Regulatory toxicology and pharmacology, vol. 70 pp.605-14.
Elliot NB, Valeix M, Macdonald DW, Loveridge AJ (2014)
Social relationships affect dispersal timing revealing a delayed infanticide in African lions, Oikos, vol. 123 pp.1049-1056.
Favreau FR, Goldizen AW, Fritz H, Blomberg SP, Best EC, Pays O (2014)
Within-population differences in personality and plasticity in the trade-off between vigilance and foraging in kangaroos, Animal Behaviour, vol. 92 pp.175-184.
Gimenez O, Buckland S T, Morgan B J, Bez N, Bertrand S, Choquet R, Dray S, Etienne M P, Fewster R, Gosselin F, Merigot B, Monestiez P, Morales J M, Mortier F, Munoz F, Ovaskainen O, Pavoine S, Pradel R, Schurr F M, Thomas L, Thuiller W, Trenkel V, De Valpine P, Rexstad E (2014)
Statistical ecology comes of age, Biology letters, vol. 10 pp.20140698-20140698.
Hurley M A, Hebblewhite M, Gaillard JM, Dray S, Taylor K A, Smith W K, Zager P, Bonenfant C (2014)
Functional analysis of normalized difference vegetation index curves reveals overwinter mule deer survival is driven by both spring and autumn phenology, Philosophical Transactions of The Royal Society B-Biological Sciences, vol. 369 pp.20130196-20130196.
Kon Kam King G, Veber P, Charles S, Delignette-Muller ML (2014)
MOSAIC_SSD: a new web tool for species sensitivity distribution to include censored data by maximum likelihood, Environmental toxicology and chemistry, vol. 33 pp.2133-9.
Merville A, Vallier A, Venner S, Siberchicot A, Fouchet D, Heddi A, Bel-Venner MC (2014)
Determining the instar of a weevil larva (Coleoptera: Curculionidae) using a parsimonious method, European Journal of Entomology, vol. 111 pp.567-573.
Miele V, Picard F, Dray S (2014)
Spatially constrained clustering of ecological networks, Methods in Ecology and Evolution, vol. 5 pp.771-779.
Miguel E, Boulinier T, de Garine-Wichatitsky M, Caron A, Fritz H, Grosbois V (2014)
Characterising African tick communities at a wild-domestic interface using repeated sampling protocols and models, Acta Tropica, vol. 138 pp.5-14.
Murigneux V, Dufour AB, Lobry JR, Pene L (2014)
Analysis of Positive Control STR Experiments Reveals that Results Obtained for FGA D3S1358 and D13S317 Condition the Success Rate of the Analysis of Routine Reference Samples, Journal of forensic sciences, vol. 59 pp.1074-1079.
Pays O, Ekori A, Fritz H (2014)
On the Advantages of Mixed-Species Groups: Impalas Adjust Their Vigilance When Associated With Larger Prey Herbivores, Ethology, vol. 120 pp.1207-1216.
Ramanankierana H, Baohanta R, Randriambanona H, Prin Y, Rakotoarimanga N, Baudoin E, Thioulouse J, Galiana A, Lebrun M, Dreyfus B, Duponnois R (2014)
Ectomycorrhizal fungi on the early colonizing shrub Sarcolaena oblongifolia F. facilitate the establishment of an endemic tree Uapaca bojeri L. in Madagascarian highland forests, International Journal of Ecology and Ecosolution, vol. 1 pp.1-15.
Tarakini T, Crosmary WG, Fritz H, Mundy P (2014)
Flight behavioural responses to sport hunting by two African herbivores, South African Journal of Wildlife Research, vol. 44 pp.76-83.
Van der Meer E, Fritz H, Blinston P, Rasmussen G (2014)
Ecological trap in the buffer zone of a protected area: effects of indirect anthropogenic mortality on the African wild dog Lycaon pictus, Oryx, vol. 48 pp.285-293.
Van der Meer E, Rasmussen G, Muvengwi J, Fritz H (2014)
Foraging costs hunting success and its implications for African wild dog (Lycaon pictus) conservation inside and outside a protected area, African Journal of Ecology, vol. 52 pp.69-76.
Wigley B, Fritz H, Coetsee C, Bond WJ (2014)
Herbivores shape woody plant communities in the Kruger National Park: Lessons from three long-term exclosures, Koedoe, vol. 56 pp.1165-1165.
Boudiaf I, Baudoin E, Sanguin H, Beddiar A, Thioulouse J, Galiana A, Prin Y, Le Roux C, Lebrun M, Duponnois R (2013)
The exotic legume tree species Acacia mearnsii alters microbial soil functionalities and the early development of a native tree species Quercus suber in North Africa, Soil Biology and Biochemistry, vol. 65 pp.172-179.
Broekhuis F, Cozzi G, Valeix M, McNutt J W, Macdonald D W (2013)
Risk avoidance in sympatric large carnivores: reactive or predictive?, Journal of Animal Ecology, vol. 82 pp.1097-1105.
Chamaillé-Jammes S, Mtare G, Makuwe E, Fritz H (2013)
African Elephants Adjust Speed in Response to Surface-Water Constraint on Foraging during the Dry-Season, PLoS one, vol. 8 pp.e59164-e59164.
Crosmary W G, Loveridge A J, Ndaimani H, Lebel S, Booth V, Côté S D, Fritz H (2013)
Trophy hunting in Africa: long-term trends in antelope horn size, Animal Conservation, vol. 16 pp.648-660.
Davidson Z, Valeix M, Van Kesteren F, Loveridge AJ, Hunt JE, Murindagomo F, Macdonald DW (2013)
Seasonal diet and prey preference of the african lion in a waterhole-driven semi-arid savanna, PLoS one, vol. 8 pp.e55182-e55182.
De Garine-WIchatitsly M, Fritz H , Chaminuka P, Caron A, Guerbois C, Pfukenyi D, Matema C, Jori F, Murwira A (2013)
Consequences of animals crossing the edges of transfrontier parks
in: People and Transfrontier Conservation Areas: Living on the Edge, EarthScan, pp.137-162.
Diagne N, Thioulouse J, Sanguin H, Prin Y, Krasova-Wade T, Sylla S, Galiana A, Baudoin E, Neyra M, Svistoonoff S, Lebrun M, Duponnois R (2013)
Ectomycorrhizal diversity enhances growth and nitrogen fixation of Acacia mangium seedlings, Soil Biology and Biochemistry, vol. 57 pp.468-476.
Dujourdy L, Charvoz C, Dalmasso M, Dufour AB (2013)
A la recherche du juste dosage : statistique appliquée à l`analyse de la cocaïne, Annales pharmaceutiques françaises, vol. 71 pp.193-200.
Duponnois R, Baudoin E, Sanguin H, Thioulouse J, Le Roux C, Tournier E, Galiana A, Prin Y, Dreyfus B (2013)
L’introduction d’acacias australiens pour réhabiliter des écosystèmes dégradés est-elle dépourvue de risques environnementaux ?, Bois et forêts des tropiques, vol. 318 pp.59-65.
Duponnois R, Ramanankierana H, Hafidi M, Baohanta R, Baudoin E, Thioulouse J, Sanguin H, Ba A, Galiana A, Bally R, Lebrun M, Prin Y (2013)
Native plant resources to optimize the performances of forest rehabilitation in Mediterranean and tropical environment: some examples of nursing plant species that improve the soil mycorrhizal potential, Comptes rendus biologies, vol. 336 pp.265-272.
Favreau F R, Pays O, Goldizen A W, Fritz H (2013)
Short-term behavioural responses of impalas in simulated antipredator and social contexts, PLoS one, vol. 8 pp.e84970-e84970.
Fritz H, Bougarel M (2013)
The Impala
in: Mammals of Africa, , pp.480-487.
Gayet G, Guillemain M, Mesleard F, Fritz H, Curtet L, Broyer J (2013)
Annual use of man-made wetlands by the mute swan (Cygnus olor), Journal of environmental management, vol. 120 pp.120-6.
Guerbois C, Dufour AB, Mtare G, Fritz H (2013)
Insights for Integrated Conservation from Attitudes of People toward Protected Areas Near Hwange National Park Zimbabwe, Conservation Biology, vol. 27 pp.844-55.
Guillier L, Danan C, Bergis H, Delignette-Muller ML, Granier S, Rudelle S, Beaufort A, Brisabois A (2013)
Use of quantitative microbial risk assessment when investigating foodborne illness outbreaks: the example of a monophasic Salmonella Typhimurium 4 5 12:i:- outbreak implicating beef burgers, International journal of food microbiology, vol. 166 pp.471-8.
Hafidi M, Ouahmane L, Thioulouse J, Sanguin H, Boumezzough A, Prin Y, Baudoin E, Galiana A, Duponnois R (2013)
Managing Mediterranean nurse plants-mediated effects on soil microbial functions to improve rock phosphate solubilization processes and early growth of Cupressus atlantica G, Ecological Engineering, vol. 57 pp.57-64.
Jaloustre S, Guillier L, Poumeyrol G, Morelli E, Delignette-Muller ML (2013)
Efficiency of a reheating step to inactivate Clostridium perfringens vegetative cells: How to measure it?, Food Control, vol. 29 pp.422-428.
Macdonald DW, Boitani L, Dinerstein E, Fritz H, Wrangham R (2013)
Conserving large mammals: are they a special case?
in: Key Topics in Conservation Biology 2, , pp.277-312.
Martin J, van Moorter B, Revilla E, Blanchard P, Dray S, Quenette PY, Allainé D, Swenson JE (2013)
Reciprocal modulation of internal and external factors determines individual movements, Journal of Animal Ecology, vol. 82 pp.290-300.
Mason N, De Bello F, Mouillot D, Pavoine S, Dray S (2013)
A guide for using functional diversity indices to reveal changes in assembly processes along ecological gradients, Journal of Vegetation Science, vol. 24 pp.794-806.
Mason N W, Wiser S K, Richardson S J, Thorsen M J, Holdaway R J, Dray S, Thomson F J, Carswell F E (2013)
Functional traits reveal processes driving natural afforestation at large spatial scales, PLoS one, vol. 8 pp.e75219-e75219.
Merville A, Venner S, Henri H, Vallier A, Menu F, Vavre F, Heddi A, Bel-Venner MC (2013)
Endosymbiont diversity among sibling weevil species competing for the same resource, BMC Evolutionary Biology, vol. 13 pp.28-28.
Miguel E, Grosbois V, Caron A, Boulinier T, Fritz H, Cornélis D, Foggin C, Makaya PV, Tshabalala PT, de Garine-Wichatitsky M (2013)
Contacts and foot and mouth disease transmission from wild to domestic bovines in Africa, Ecosphere, vol. 4 pp.unsp51-unsp51.
Murwira A, de Garine-Wichatitsky M, Zengeya F, Poshiwa X, Matema S, Caron A, Guerbois C, Hellard E, Fritz H (2013)
Resource gradients and movements across the edge of transfrontier parks
in: Transfrontier conservation areas; people living on the edge, , pp.123-136.
Ndoye L, Soumaré A, Agbangba EC, Thioulouse J, Galiana A, Prin Y, Duponnois R (2013)
A new process to promote the use of controlled mycorrhization practice in forest nurseries, African Journal of Agricultural Research, vol. 8 pp.308-316.
Pavoine S, Blondel J, Dufour AB, Gasc A, Bonsall MB (2013)
A New Technique for Analysing Interacting Factors Affecting Biodiversity Patterns: Crossed-DPCoA, PLoS one, vol. 8 pp.e54530-e54530.
Pelisson PF, Bel-Venner MC, Giron D, Menu F, Venner S (2013)
From Income to Capital Breeding: When Diversified Strategies Sustain Species Coexistence, PLoS one, vol. 8 pp.e76086-e76086.
Pelisson PF, Bernstein C, Débias F, Menu F, Venner S (2013)
Dispersal and dormancy strategies among insect species competing for a pulsed resource, Ecological Entomology, vol. 38 pp.470-477.
Ranjard L, Dequiedt S, Chemidlin Prevost-Boure N, Thioulouse J, Saby NP, Lelievre M, Maron PA, Morin FE, Bispo A, Jolivet C, Arrouays D, Lemanceau P (2013)
Turnover of soil bacterial diversity driven by wide-scale environmental heterogeneity, Nature communications, vol. 4 pp.1434-1434.
Reino L, Beja P, Araújo MB, Dray S, Segurado P, Heikkinen R (2013)
Does local habitat fragmentation affect large-scale distributions? The case of a specialist grassland bird, Diversity and Distributions, vol. 19 pp.423-432.
Seeber P A, Duncan P, Fritz H, Ganswindt A (2013)
Androgen changes and flexible rutting behaviour in male giraffes, Biology Letters, vol. 9 pp.20130396-20130396.
Siberchicot A, Dray S (2013)
Conference Report: Deuxièmes Rencontres R, The R Journal, vol. 5/2 pp.164-165.
Thioulouse J, Sauguin H, Prin Y, Duponnois R (2013)
Méthodes d`analyse multivariée pour l`étude de l`influence de la mycorhizosphère sur la structure et le fonctionnement des communautés bactériennes du sol
in: Des champignons symbiotiques contre la désertification. Ecosystèmes mediterranéens tropicaux et insulaires, , pp.474-508.
Valéry L, Fritz H, Lefeuvre JC (2013)
Another call for the end of invasion biology, Oikos, vol. 122 pp.1143-1146.
van der Meer E, Mpofu J, Rasmussen G, Fritz H (2013)
Characteristics of African wild dog natal dens selected under different interspecific predation pressures, Mammalian Biology, vol. 78 pp.336-343.
Baohanta R, Thioulouse J, Ramanankierana H, Prin Y, Rasolomampianina R, Baudoin E, Rakotoarimanga N, Galiana A, Randriambanona H, Lebrun M, Duponnois R (2012)
Restoring native forest ecosystems after exotic tree plantation in Madagascar: combination of the local ectotrophic species Leptolena bojeriana and Uapaca bojeri mitigates the negative influence of the exotic species Eucalyptus camaldulensis and Pinus patula, Biological Invasions, vol. 14 pp.2407-2421.
Bilgo A, Sangare SK, Thioulouse J, Prin Y, Hien V, Galiana A, Baudoin E, Hafidi M, Bâ AM, Duponnois R (2012)
Response of native soil microbial functions to the controlled mycorrhization of an exotic tree legume Acacia holosericea in a Sahelian ecosystem, Mycorrhiza, vol. 22 pp.175-187.
Billoir E, Delhaye H, Forfait C, Clément B, Triffault-Bouchet G, Charles S, Delignette-Muller M-L (2012)
Comparison of bioassays with different exposure time patterns : The added value of dynamic modelling in predictive ecotoxicology, Ecotoxicology and Environmental Safety, vol. 75 pp.80-86.
Brochet AL, Mouronval JB, Aubry P, Gauthier-Clerc M, Green AJ, Fritz H, Guillemain M (2012)
Diet and Feeding Habitats of Camargue Dabbling Ducks: What Has Changed Since the 1960s?, Waterbirds, vol. 35 pp.555-576.
Brochet A-L, Dessborn L, Legagneux P, Elmberg J, Gautier-Clerc M, Fritz H, Guillemain M (2012)
Is diet segregation between dabbling ducks due to food partitioning? A review of seasonal patterns in the Western Palearctic, Journal of Zoology, vol. 286 pp.171-178.
Commeau N, Parent E, Delignette-Muller ML, Cornu M (2012)
Fitting a lognormal distribution to enumeration and absence/presence data, International Journal of Food Microbiology, vol. 155 pp.146-152.
Covain R, Fisch-Muller S, Montoya-Burgos J I, Mol J H, Le Bail P-Y, Dray S (2012)
The Harttiini (Siluriformes Loricariidae) from the Guianas: a multi-table approach to assess their diversity evolution and distribution*, Cybium, vol. 36 pp.115-161.
Crosmary WG, Makumbe P, Côté SD, Fritz H (2012)
Vulnerability to predation and water constraints limit behavioural adjustments of ungulates in response to hunting risk, Animal Behaviour, vol. 83 pp.1367-1376.
Crosmary W-G, Valeix M, Fritz H, Madzikanda H, Côté S D (2012)
African ungulates and their drinking problems: hunting and predation risks constrain acces to water, Animal Behaviour, vol. 83 pp.145-153.
Davidson Z, Valeix M, Loveridge AJ, Hunt JE, Johnson PJ, Madzikanda H, Macdonald DW (2012)
Environmental determinants of habitat and kill site selection in a large carnivore: scale matters, Journal of Mammalogy, vol. 93 pp.677-685.
Dray S, Pélissier R, Couteron P, Fortin M-J, Legendre P, Peres-Neto P-R, Bellier E, Bivand R, Blanchet F-G, De Caceres M, Dufour A-B, Heegaard E, Jombart T, Munoz F, Oksanen J, Thioulouse J, Wagner H-H (2012)
Community ecology in the age of multivariate multiscale spatial analysis, Ecological Monographs, vol. 82 pp.257-275.
Dufour AB (2012)
La part du logiciel R dans l’enseignement de la statistique en biologie. Le site Web de Lyon., Statistique et Enseignement, vol. 2 pp.41-47.
Duponnois R, Baudoin E, Thioulouse J, Hafiidi M, Galiana A, Lebrun M, Prin Y (2012)
The Impact of Mycorrhizosphere Bacterial Communities on Soil Biofunctioning in Tropical and Mediterranean Forest Ecosystems
in: Bacteria in Agrobiology: Plant Probiotics, , pp.59-65.
Foray V, Pelisson P-F, Bel-Venner MC, Desouhant E, Venner S, Menu F, Giron D, Rey B (2012)
A handbook for uncovering the complete energetic budget in insects: the van Handel’s method (1985) revisited, Physiological entomology, vol. 37 pp.295-302.
Forfait C, Charles S, Billoir E, Delignette-Muller M-L (2012)
Survival data analyses in ecotoxicology: critical effect concentrations methods and models. What should we use?, Ecotoxicology, vol. 21 pp.1072-1083.
Fox DR, Billoir E, Charles S, Delignette-Muller M-L, Lopes C (2012)
What to do with NOECS/NOELS - prohibition or innovation?, Integr Environ Assess Manag, vol. 8 pp.764-766.
Guerbois C, Chapanda E, Fritz H (2012)
Combining multi-scale socio-ecological approaches to understand the susceptibility of subsistence farmers to elephant crop raiding on the edge of a protected area, Journal of Applied Ecology, vol. 49 pp.1149-1158.
Jaloustre S, Guillier L, Morelli E, Noël V, Delignette-Muller M-L (2012)
Modeling of Clostridium perfringens vegetative cell inactivation in beef-in-sauce products: A meta-analysis using mixed linear models, International Journal of Food Microbiology, vol. 154 pp.44-51.
Kleyer M, Dray S, De Bello F, Leps J, Pakeman JR, Strauss B, Thuiller W, Lavorel S (2012)
Assessing species and community functional responses to environmental gradients: which multivariate methods?, Journal of Vegetation Science, vol. 23 pp.805-821.
Morin L, Lobry JR, Peyron F, Wallon M (2012)
Seasonal variations in acute toxoplasmosis in pregnant women in the Rhône-Alpes region (France), Clinical Microbiology and Infection, vol. 18 pp.E401-E403.
Munkemuller T, Lavergne S, Bzeznik B, Dray S, Jombart T, Schiffers K, Thuiller W (2012)
How to measure and test phylogenetic signal, Methods in Ecology and Evolution, vol. 3 pp.743-756.
Pays O, Blanchard P, Valeix M, Chamaille-Jammes S, Duncan P, Périquet S, Lombard M, Ncube G, Tarakini T, Makuwe E, Fritz H (2012)
Detecting predators and locating competitors while foraging: an experimental study of a medium-sized herbivore in an African savanna, Oecologia, vol. 169 pp.419-30.
Pays O, Sirot E, Fritz H (2012)
Collective Vigilance in the Greater Kudu: Towards a Better Understanding of Synchronization Patterns, Ethology, vol. 118 pp.1-9.
Pelisson P-F, Bel-Venner MC, Rey B, Burgevin L, Martineau F, Fourel F, Lecuyer C, Menu F, Venner S (2012)
Contrasted breeding strategies in four sympatric sibling insect species: when a proovigenic and capital breeder copes with a stochastic environment, Functional Ecology, vol. 26 pp.198-206.
Peres-Neto P-R, Leibold M-A, Dray S (2012)
Assessing the effects of spatial contingency and environmental filtering on metacommunity phylogenetics, Ecology, vol. 93 pp.S14-S30.
Periquet S, Todd-Jones L, Valeix M, Stapelkamp B, Elliot N, Wijers M, Pays O, Fortin D, Madzikanda H, Fritz H, Macdonald DW, Loveridge AJ (2012)
Influence of immediate predation risk by lions on the vigilance of prey of different body size, Behavioral Ecology, vol. 23 pp.970-976.
Suraud J P, Fennessy J, Bonnaud E, Issa A M, Fritz H, Gaillard JM (2012)
Higher than expected growth rate of the Endangered West African giraffe Giraffa camelopardalis peralta : a successful human–wildlife cohabitation, Oryx, vol. 46 pp.577-583.
TerBraak C, Cormont A, Dray S (2012)
Improved testing of species traits–environment relationships in the fourth-corner problem, Ecology, vol. 93 pp.1525-1526.
Thioulouse J, Prin Y, Duponnois R (2012)
Multivariate analyses in soil microbial ecology: a new paradigm, Environmental and Ecological Statistics, vol. 19 pp.499-520.
Tolon V, Martin J, Dray S, Loison A, Fischer C, Baudet E (2012)
Predator–prey spatial game as a tool to understand the effects of protected areas on harvester–wildlife interactions, Ecological Applications, vol. 22 pp.648-657.
Valeix M, Hemson G, Loveridge AJ, Mills G, Macdonald DW (2012)
Behavioural adjustments of a large carnivore to access secondary prey in a human-dominated landscape, Journal of Applied Ecology, vol. 49 pp.73-81.
Valeix M, Loveridge AJ, Macdonald DW (2012)
Influence of prey dispersion on territory and group size of African lions: a test of the resource dispersion hypothesis, Ecology, vol. 93 pp.2490-2496.
van der Meer E, Pays O, Fritz H, Fusani L (2012)
The Effect of Simulated African Wild Dog Presence on Anti-predator Behaviour of Kudu and Impala, Ethology, vol. 118 pp.1018-1027.
Wesuls D, Oldeland J, Dray S (2012)
Disentangling plant trait responses to livestock grazing from spatio-temporal variation: the partial RLQ approach, Journal of Vegetation Science, vol. 23 pp.98-113.
Arrouays D, Saby NPA, Thioulouse J, Jolivet C, Boulonne L, Ratié C (2011)
Large trends in French topsoil characteristics are revealed by spatially constrained multivariate analysis, Geoderma, vol. 161 pp.107-114.
Billoir E, Delhaye H, Clément B, Delignette-Muller M-L, Charles S (2011)
Bayesian modelling of daphnid responses to time-varying cadmium exposure in laboratory aquatic microcosms, Ecotoxicology and Environmental Safety, vol. 74 pp.693-702.
Brind`Amour A, Boisclair D, Dray S, Legendre P (2011)
Relationships between species feeding traits and environmental conditions in fish communities: a three-matrix approach, Ecological Applications, vol. 21 pp.363-377.
Ciliberti A, Berny P, Delignette-Muller M-L, de Buffrénil V (2011)
The Nile monitor (Varanus niloticus; Squamata: Varanidae) as a sentinel species for lead and cadmium contamination in sub-Saharan wetlands, Science of the Total Environment, vol. 409 pp.4735-4745.
Davidson Z, Valeix M, Loveridge AJ, Madzikanda H, Macdonald DW (2011)
Socio-spatial behaviour of an African lion population following perturbation by sport hunting, Biological Conservation, vol. 144 pp.114-121.
Debernardi A, Suzanne E, Formant A, Pène L, Dufour A-B, Lobry JR (2011)
One year variability of peak heights heterozygous balance and inter-locus balance for the DNA positive control of AmpFlSTR Identifiler STR kit, Forensic Science International: Genetics, vol. 5 pp.43-49.
Delignette-Muller M-L, Forfait C, Billoir E, Charles S (2011)
A NEW PERSPECTIVE ON THE DUNNETT PROCEDURE : FILLING THE GAP BETWEEN NOEC/LOEC AND ECx CONCEPTS, Environmental Toxicology and Chemistry, vol. 30 pp.2888-2891.
Dequiedt S, Saby NPA, Lelievre M, Jolivet C, Thioulouse J, Toutain B, Arrouays D, Bispo A, Lemanceau P, Ranjard L (2011)
Biogeographical patterns of soil molecular microbial biomass as influenced by soil characteristics and management, Global Ecology and Biogeography, vol. 20 pp.641-652.
Dray S (2011)
A new perspective about Moran`s Coefficient: Spatial autocorrelation as a linear regression problem, Geographical Analysis, vol. 43 pp.127-141.
Dray S, Jombart T (2011)
Revisiting Guerry`s data: introducing spatial constraints in multivariate analysis., The Annals of Applied Statistics, vol. 5 pp.2278-2299.
Duponnois R, Ouahmane L, Kane A, Thioulouse J, Hafidi M, Boumezzough A, Prin Y, Baudoin E, Galiana A, Dreyfus B (2011)
Nurse shrubs increased the early growth of Cupressus seedling by enhancing belowground mutualism ans doil microbial activity, Soil Biology & Biochemistry, vol. 43 pp.2160-2168.
Fritz H, Loreau M, Chamaillé-Jammes S, Valeix M, Clobert J (2011)
A food web perspective on large herbivore community limitation, Ecography, vol. 34 pp.196-202.
Gayet G, Eraud C, Benmergui M, Broyer J, Mesleard F, Fritz H, Guillemain M (2011)
Breeding mute swan habitat selection when accounting for detectability: a plastic behaviour consistent with rapidly expanding populations, European Journal of Wildlife Research, vol. 57 pp.1051-1056.
Gayet G, Guillemain M, Benmergui M, Mesleard F, Boulinier T, Bienvenu J-P, Fritz H, Broyer J (2011)
Effects of seasonality isolation and patch quality for habitat selection processes by mute swans Cygnus olor in a fishpond landscape, Oikos, vol. 120 pp.801-812.
Gayet G, Guillemain M, Mesléard F, Fritz H, Vaux V, Broyer J (2011)
Are Mute Swans Cygnus olor really limiting fishpond use by waterbirds in the Dombes Eastern France, Journal of Ornithology, vol. 152 pp.45-53.
Green A, Georgiev BB, Brochet AL, Gauthier-Clerc M, Fritz H, Guillemain M (2011)
Determinants of the prevalence of the cloacal cestode textit Cloacotaenia megalops in teal wintering in the French Camargue, European Journal of Wildlife Research, vol. 57 pp.275-281.
Haned H, Pène L, Lobry JR, Dufour A-B, Pontier D (2011)
Estimating the Number of Contributors to Forensic DNA Mixtures: Does Maximum Likelihood Perform Better Than Maximum Allele Count?, Journal of Forensic Sciences, vol. 56 pp.23-28.
Hibert F, Maillard D, Fritz H, Garel M, Abdou H N, Winterton P (2011)
Ageing of ungulate pellets in semi-arid landscapes: how the shade of colour can refine pellet-group counts, European Journal of Wildlife Research, vol. 57 pp.495-503.
Illius A W, Fritz H, Fryxell J (2011)
Variability Heterogeneity Diversity and Productivity in Grazing Systems
in: Grassland productivity and ecosystem services, , pp.37-45.
Jaloustre S, Cornu M, Morelli E, Noël C, Delignette-Muller M-L (2011)
Bayesian modeling of Clostridium perfringens growth in beef-in-sauce products, Food Microbiology, vol. 28 pp.311-320.
Kielbassa J, Charles S, Delignette-Muller M-L (2011)
The importance of incorporating age and sex when backcalculating length in bullhead Cottus gobio, Journal of Fish Biology, vol. 78 pp.1492-1507.
Pelisson P-F, Henri H, Bel-Venner MC, Allemand R, Merville A, Menu F, Venner S (2011)
Identification at the larval stage of four Curculio species coexisting on oak trees using PCR-RFLP, Entomologia Experimentalis et Applicata, vol. 138 pp.77-82.
Plantureux S, de Sainte Marie C, Agreil C, Amiaud B, Dobremez L, Fargier J, Fleury P, Fritz H, Langlois JL, Magda D, Mestelan P, Meuret M, Mougey T, Nettier B, Sérès C, Vansteelant JY (2011)
Analyse de la mise en œuvre des mesures agri-environnementales à obligation de résultat sur les surfaces herbagères, Fourrages, vol. 208 pp.271-281.
Thioulouse J (2011)
SIMULTANEOUS ANALYSIS OF A SEQUENCE OF PAIRED ECOLOGICAL TABLES: A COMPARISON OF SEVERAL METHODS, The Annals of Applied Statistics, vol. 5 pp.2300-2325.
Valeix M (2011)
Temporal dynamics of dry-season water-hole use by large African herbivores in two years of contrasting rainfall in Hwange National Park Zimbabwe, Journal of Tropical Ecology, vol. 27 pp.163-170.
Valeix M, Chamaillé-Jammes S, Loveridge A J, Davidson Z, Hunt J E, Madzikanda H, Macdonald D W (2011)
Understanding Patch Departure Rules for Large Carnivores : Lion Movements Support a Patch-Disturbance Hypothesis, American Naturalist, vol. 178 pp.269-275.
Valeix M, Fritz H, Sabatier R, Murindagomo F, Cumming D, Duncan P (2011)
Elephant-induced structural changes in the vegetation and habitat selection by large herbivores in a African savanna, Biological Conservation, vol. 144 pp.902-912.
Valiente-Moro C, Thioulouse J, Chauve C, Zenner L (2011)
Diversity Geographic Distribution and Habitat-Specific Variations of Microbiota in Natural Populations of the Chicken Mite Dermanyssus gallinae, Journal of Medical Entomology, vol. 48 pp.788-796.
van der Meer E, Moyo M, Rasmussen A, Fritz H (2011)
An empirical and experimental test of risk and costs of kleptoparasitism for African wild dogs (Lycaon pictus) inside and outside a protected area, Behavioral Ecology, vol. 22 pp.985-992.
Venner S, Pelisson P-F, Bel-Venner MC, Debias F, Rajon E, Menu F (2011)
Coexistence of Insect Species competing for a pulsed resource: toward a unified theory of biodiversity in fluctuating environments, PLoS One, vol. 6 pp.e18039-e18039.
Vergnes M, Ginevra C, Kay E, Normand P, Thioulouse J, Jarraud S, Maurin M, Schneider D (2011)
Insertion Sequences as Highly Resolutive Genomic Markers for Sequence Type 1 Legionella pneumophila Paris, Journal of Clinical Microbiology, vol. 49 pp.315-324.
Bonnet O, Fritz H, Gignoux J, Meuret M (2010)
Challenges of foraging on a high-quality but unpredictable food source: the dynamics of grass production and consumption in savanna grazing lawns, Journal of Ecology, vol. 98 pp.908-916.
Brochet AL, Gauthier-Clerc M, Guillemain M, Fritz H, Waterkeyn A, Baltanas A, Green AJ (2010)
Field evidence of dispersal of branchiopods ostracods and bryozoans by teal textit(Anas crecca) in the Camargue (southern France), Hydrobiologia, vol. 637(1) pp.255-261.
Brochet AL, Guillemain M, Gauthier-Clerc M, Fritz H, Green AJ (2010)
Endozoochory of Mediterranean aquatic plant seeds by teal after a period of desiccation: Determinants of seed survival and influence of retention time on germinability and viability, Aquatic Botany, vol. 93 pp.99-106.
Dray S, Royer-Carenzi M, Calenge C (2010)
The exploratory analysis of autocorrelation in animal-movement studies, Ecological Research, vol. 25 pp.673-681.
Ducrot V, Teixeira-Alves M, Lopes C, Delignette-Muller M-L, Charles S, Lagadic L (2010)
Development of partial life-cycle experiments to assess the effects of endocrine disruptors on the freshwater gastropod Lymnaea stagnalis: a case-study with vinclozolin, Ecotoxicology, vol. 19(7) pp.1312-1321.
Dufour A-B (2010)
Poser un diagnostic sur les résultats d`une régression linéaire simple : points aberrants points extrêmes et points influents, Biométrie Humaine et anthropologie, vol. 28(3-4) pp.95-103.
Fleurance G, Duncan P, Fritz H, Gordon I J, Grenier-Loustalot M F (2010)
Influence of sward structure on daily intake and foraging behaviour by horses, Animal, vol. 4 pp.480-5.
Gambiza J, Prins HHT, Fritz H, Nyathi P (2010)
Livestock and wildlife
in: The dry forests and woodlands of Africa, Earthscan London UK, pp.683-696.
Guillemain M, Devineau O, Brochet AL, Fuster J, Fritz H, Green AJ, Gauthier-Clerc M (2010)
What is the spatial unit for a wintering teal Anas crecca ? Weekly day roost fidelity inferred from nasal saddles in the Camargue southern France, Wildlife Biology, vol. 16 pp.215-220.
Hibert F, Calenge C, Fritz H, Maillard D, Bouché P, Ipavec A, Convers A, Ombredane D, Visscher MN (2010)
Spatial avoidance of invading pastoral cattle by wild ungulates: insights from using point process statistics, Biodiversity and Conservation, vol. 19 pp.2003-2024.
Jombart T, Balloux F, Dray S (2010)
adephylo: new tools for investigating the phylogenetic signal in biological traits, Bioinformatics, vol. 26(15) pp.1907-1909.
Kielbassa J, Delignette-Muller M-L, Pont D, Charles S (2010)
Application of a temperature-dependent von Bertalanffy growth model to bullhead Cottus gobio, Ecological Modelling, vol. 221 pp.2475-2481.
Linnell J D C, Rondeau D, Reed D H, Williams R, Altwegg R, Raxworthy C J, Austin J D, Hanley N, Fritz H, Evans D M, Gordon I J, Reyers B, Redpath S, Pettorelli N (2010)
Confronting the costs and conflicts associated with biodiversity, Animal Conservation, vol. 13 pp.429-431.
Martin J, Chamaillé-Jammes S, Nichols JD, Fritz H, Hines JE, Fonnesbeck CJ, MacKenzie DI, Bailey LL (2010)
Simultaneous modeling of habitat suitability occupancy and relative abundance: African elephants in Zimbabwe, Ecological Applications, vol. 20 pp.1173-1182.
Pellerin M, Calenge C, Saïd S, Gaillard J-M, Fritz H, Duncan P, Van Laere G (2010)
Habitat use by female western roe deer (Capreolus capreolus): influence of resource availability on habitat selection in two contrasting years, Canadian Journal of Zoology, vol. 88 pp.1052-1062.
Periquet S, Valeix M, Loveridge AJ, Madzikanda H, Macdonald DW, Fritz H (2010)
Individual vigilance of African herbivores while drinking: the role of immediate predation risk and context, Animal Behaviour, vol. 79 pp.665-671.
Poisbleau M, Guillon N, Fritz H (2010)
Preservation of winter social dominance status in Brent Geese Branta bernicla bernicla within and across winters, Journal of Ornithology, vol. 151 pp.737-744.
Pontes LD, Agreil C, Magda D, Gleizes B, Fritz H (2010)
Feeding behaviour of sheep on shrubs in response to contrasting herbaceous cover in rangelands dominated by Cytisus scoparius L., Applied Animal Behaviour Science, vol. 124 pp.35-44.
Pouillot R, Delignette-Muller M-L (2010)
Evaluating variability and uncertainty separately in microbial quantitative risk assessment using two R packages, International Journal of Food Microbiology, vol. 142 pp.330-340.
Ranjard L, Dequiedt S, Jolivet C, Saby NPA, Thioulouse J, Harmand J, Loisel P, Rapaport A, Fall S, Simonet P, Joffre R, Chemidlin Prévost-Bouré N, Maron P-A, Mougel C, Martin MP, Toutain B, Arrouays D, Lemanceau P (2010)
Biogeography of soil microbial communities: a review and a description of the ongoing french national initiative, Agronomy for Sustainable Development, vol. 30 pp.359-365.
Thioulouse J, Valiente Moro C, Zenner L (2010)
Online Reproducible Research: An Application to Multivariate Analysis of Bacterial DNA Fingerprint Data, The R Journal, vol. 2 pp.44-52.
Valeix M, Loveridge AJ, Davidson Z, Madzikanda H, Fritz H, Macdonald DW (2010)
How key habitat features influence large terrestrial carnivore movements: waterholes and African lions in a semi-arid savanna of north-western Zimbabwe, Landscape Ecology, vol. 25 pp.337-351.
Venner S, Bernstein C, Dray S, Bel-Venner MC (2010)
Make Love Not War: When Should Less Competitive Males Choose Low-Quality but Defendable Females?, The American Naturalist, vol. 175 pp.650-661.
Bel-Venner MC, Mondy N, Arthaud F, Marandet J, Giron D, Venner S, Menu F (2009)
Ecophysiological attributes of adult overwintering in insects: insights from a field study in the nut weevil Curculio nucum, Physiological Entomology, vol. 34 pp.61-70.
Billoir E, da Silva Ferrão-Filho A, Delignette-Muller M-L, Charles S (2009)
DEBtox theory and matrix population models as helpful tools in understanding the interaction between toxic cyanobacteria and zooplankton, Journal of Theoretical Biology, vol. 258 pp.380-388.
Brochet AL, Guillemain M, Fritz H, Gauthier-Clerc M, Green AJ (2009)
Plant dispersal by teal (Anas crecca) in the Camargue: duck guts are more important than their feet, Freshwater biology, vol. 55 pp.1262-1273.
Brochet AL, Guillemain M, Lebarbenchon C, Fritz H, Green AJ, Renaud F, Thomas F, Gauthier-Clerc M (2009)
The Potential Distance of Highly Pathogenic Avian Influenza Virus Dispersal by Mallard Common Teal and Eurasian Pochard, EcoHealth, vol. 6 pp.449-457.
Brochet AL, Guillemain M, Fritz H, Gauthier-Clerc M, Green AJ (2009)
The role of migratory ducks in the long-distance dispersal of native plants and the spread of exotic plants in Europe, Ecography, vol. 32 pp.919-928.
Calenge C, Dray S, Royer-Carenzi M (2009)
The concept of animals trajectories from a data analysis perspective, Ecological Informatics, vol. 4 pp.34-41.
Chamaillé-Jammes S, Fritz H (2009)
Precipitation–NDVI relationships in eastern and southern African savannas vary along a precipitation gradient, International Journal of Remote Sensing, vol. 30 pp.3409-3422.
Chamaillé-Jammes S, Fritz H, Madzikanda H (2009)
Piosphere contribution to landscape heterogeneity: a case study of remote-sensed woody cover in a high elephant density landscape, Ecography, vol. 32 pp.871-880.
Chamaillé-Jammes S, Valeix M, Bourgarel M, Murindagomo F, Fritz H (2009)
Seasonal density estimates of common large herbivores in Hwange National Park Zimbabwe, African Journal of Ecology, vol. 47(4) pp.804-808.
Dequiedt S, Lelièvre M, Jolivet C, Saby NPA, Martin M, Thioulouse J, Maron P-A, Mougel C, Chemidlin Prévost-Bouré N, Arrouays D, Lemanceau P, Ranjard L (2009)
ECOMIC-RMQS: biogéographie microbienne à l`échelle de la France, Etude et Gestion des Sols, vol. 16(3) pp.219-231.
Dequiedt S, Thioulouse J, Jolivet C, Savy NPA, Lelievre M, Maron P-A, Martin M, Chemidlin Prévost-Bouré N, Toutain B, Arrouays D, Lemanceau P, Ranjard L (2009)
Biogeographical patterns of soil bacterial communities, Environmental Microbiology Reports, vol. 1(4) pp.251-255.
Desmonts D, Fritz H, Cornulier T, Maheo R (2009)
Rise in human activities on the mudflats and Brent Geese textit(Branta bernicla) wintering distribution in relation to Zostera spp. beds: a 30-year study, Journal of Ornithology, vol. 150 pp.733-742.
Duponnois R, Hafidi M, Thioulouse J, Galiana A, Ouahmane L, Dreyfus B, Prin Y (2009)
Monitoring the Development of Nurse Plant Species to Improve the Performances of Reforestation Programs in Mediterranean Areas
in: Microbial Strategies for Crop Improvement, Springer-Verlag Berlin, pp.255-265.
Durant D, Desnouhes L, Fritz H, Guillemain M, Edouard N, Vial C (2009)
Size-related consumption of Scirpus maritimus tubers by greylag geese Anser anser explained by their functional response, Behavioural Processes, vol. 80(1) pp.39-45.
Durant D, Desnouhes L, Guillemain M, Fritz H, Mesléard F (2009)
How do shoot clipping and tuber harvesting combine to affect Bolboschoenus maritimus recovery capacities?, Botany-Botanique, vol. 87(9) pp.883-887.
Faye A, Krasova-Wabe T, Thiao M, Thioulouse J, Neyra M, Prin Y, Galiana A, Ndoye I, Dreyfus B, Duponnois R (2009)
Controlled ectomycorrhization of an exotic legume tree species Acacia holosericea affects the structure of root nodule bacteria community and their symbiotic effectiveness on Faidherbia albida a native Sahelian Acacia, Soil Biology & Biochemistry, vol. 41(6) pp.1245-1252.
Fleurance G, Fritz H, Duncan P, Gordon J, Edouard N, Vial C (2009)
Instantaneous intake rate in horses of different body sizes: Influence of sward biomass and fibrousness, Applied Animal Behaviour Science, vol. 117 pp.84-92.
Jombart T, Dray S, Dufour A-B (2009)
Finding essential scales of spatial variation in ecological data: a multivariate approach, Ecography, vol. 32(1) pp.161-168.
Jombart T, Pontier D, Dufour A-B (2009)
Genetic markers in the playground of multivariate analysis, Heredity, vol. 102 pp.330-341.
Lebarbenchon C, Albespy F, Brochet AL, Grandhomme V, Renaud F, Fritz H, Green AJ, Thomas F, Van der Werf S, Aubry P, Guillemain M, Gauthier-Clerc M (2009)
Spread of Avian Influenza Viruses by Common Teal textit(Anas crecca) in Europe, PLoS ONE, vol. 4(10) pp.1-9.
Loveridge AJ, Valeix M, Davidson Z, Murindagomo F, Fritz H, Macdonald DW (2009)
Changes in home range size of African lions in relation to pride size and prey biomass in a semi-arid savanna, Ecography, vol. 32(6) pp.953-962.
Montet M-P, Christieans S, Thevenot D, Coppet V, Ganet S, Delignette-Muller M-L, Dunière L, Miszczycha S, Vernozy-Rozand C (2009)
Fate of acid-resistant and non-acid resistant Shiga toxin-producing Escherichia coli strains in experimentally contaminated French fermented raw meat sausages, International Journal of Food Microbiology, vol. 129(3) pp.264-270.
Ouahmane L, Revel JC, Hafidi M, Thioulouse J, Prin Y, Galiana A, Dreyfus B, Duponnois R (2009)
Responses of Pinus halepensis growth soil microbial catabolic functions and phosphate-solubilizing bacteria after rock phosphate amendment and ectomycorrhizal inoculation, Plant Soil, vol. 320 (1-2) pp.169-179.
Pavoine S, Vallet J, Dufour A-B, Gachet S, Daniel H (2009)
On the challenge of treating various types of variables: application for improving the measurement of functional diversity, OIKOS, vol. 118(3) pp.391-402.
Pouillot R, Goulet V, Delignette-Muller M-L, Mahé A, Cornu M (2009)
Quantitative Risk Assessment of Listeria monocytogenes in French Cold-Smoked Salmon: II. Risk Characterization, Risk Analysis, vol. 29(6) pp.806-819.
Rajon E, Venner S, Menu F (2009)
Spatially heterogeneous stochasticity and the adaptive diversification of dormancy, Journal of Evolutionary Biology, vol. 22 pp.2094-2103.
Saby NPA, Thioulouse J, Jolivet C, Ratié C, Boulonne L, Bispo A, Arrouays D (2009)
Multivariate analysis of the spatial patterns of 8 trace elements using the French soil monitoring network data, Science of the Total Environment, vol. 407 pp.5644-5652.
Sanon A, Andrianjaka ZN, Prin Y, Bally R, Thioulouse J, Comte G, Duponnois R (2009)
Rhizosphere microbiota interfers with plant-plant interactions, Plant Soil, vol. 321(1-2) pp.259-278.
Santos CL, Tavares F, Thioulouse J, Normand P (2009)
Aphylogenomic analysis of bacterial helix^turn^helix transcription factors, FEMS Microbiology Reviews, vol. 33 pp.411-429.
Tolon V, Dray S, Loison A, Zeileis A, Fischer C, Baubet E (2009)
Responding to spatial and temporal variations in predation risk: space use of a game species in a changing landsape of fear, Canadian journal of zoology, vol. 87 pp.1129-1137.
Valeix M, Fritz H, Canevet V, Le Bel S, Madzikanda H (2009)
Do elephants prevent other African herbivores from using waterholes in the dry season?, Biodiversity and Conservation, vol. 18 pp.569-576.
Valeix M, Fritz H, Loveridge AJ, Davidson Z, Hunt JE, Murindagomo F, Macdonald DW (2009)
Does the risk of encountering lions influence African herbivore behaviour at waterholes?, Behavioral Ecology and Sociobiology, vol. 63 pp.1483-1494.
Valeix M, Loveridge AJ, Chamaillé-Jammes S, Davidson Z, Murindagomo F, Fritz H, Macdonald DW (2009)
Behavioral adjustments of African herbivores to predation risk by lions: Spatiotemporal variations influence habitat use, Ecology, vol. 90(1) pp.23-30.
Valery L, Fritz H, Lefeuvre J-C, Simberloff D (2009)
Invasive species can also be native, Trends in Ecology & Evolution, vol. 24(11) pp.585-585.
Valéry L, Fritz H, Lefeuvre J-C, Simberloff D (2009)
Ecosystem-level consequences of invasions by native species as a way to investigate relationships between evenness and ecosystem function, Biological Invasions, vol. 11(3) pp.609-617.
Valiente Moro C, Thioulouse J, Chauve C, Normand P, Zenner L (2009)
Bacterial taxa associated with the hematophagous mite Dermanyssus gallinae detected by 16S rRNA PCR amplification and TTGE fingerprinting, Research in Microbiology, vol. 160 pp.63-70.
Venner S, Feschotte C, Biémont C (2009)
Dynamics of transposable elements:towards a community ecology of the genome, Trends in Genetics, vol. 25(7) pp.317-323.
Bel-Venner MC, Dray S, Allainé D, Menu F, Venner S (2008)
Unexpected male choosiness for mates in a spider, Proceedings of The Royal Society B-Biological Sciences, vol. 275 pp.77-82.
Billoir E, Delignette-Muller M-L, Péry A-RR, Charles S (2008)
A Bayesian Approach to Analyzing Ecotoxicological Data, Environmental Science & Technology, vol. 42(23) pp.8978-8984.
Billoir E, Delignette-Muller M-L, Péry A-RR, Geffard O, Charles S (2008)
Statistical cautions when estimating DEBtox parameters, Journal of Theoretical Biology, vol. 254 pp.55-64.
Blanchard P, Fritz H (2008)
Seasonal variation in rumination parameters of free-ranging impalas (Aepyceros melampus), Wildlife biology, vol. 14(3) pp.372-378.
Blanchard P, Sabatier R, Fritz H (2008)
Within-group spatial position and vigilance: a role also for competition? The case of impalas (Aepyceros melampus) with a controlled food supply, Behavioral ecology and sociobiology, vol. 62 pp.1863-1868.
Chamaille-Jammes S, Fritz H, Valeix M, Murindagomo F, Clobert J (2008)
Resource variability aggregation and direct density dependence in an open context: the local regulation of an African elephant population, Journal of Animal Ecology, vol. 77 pp.135-144.
Covain R, Dray S, Fisch-Muller S, Montoya-Burgos JI (2008)
Assessing phylogenetic dependence of morphological traits using co-inertia prior to investigate character evolution in Loricariinae catfishes, Molecular Phylogenetics and evolution, vol. 46 pp.986-1002.
Delignette-Muller M-L, Cornu M (2008)
Quantitative risk assessment for Escherichia coli O157:H7 in frozen ground beef patties consumed by young children in French households, International Journal of Food Microbiology, vol. 128(1) pp.77-84 .
Devillers H, Lobry JR, Menu F (2008)
An agent-based model for predicting the prevalence of Trypanosoma cruzi I and II in their host and vector populations, Journal of Theoretical Biology, vol. 255 pp.307-315.
Dray S (2008)
On the number of principal components: A test of dimensionality based on measurements of similarity between matrices, Computational Statistics & Data Analysis, vol. 52 pp.2228-2237.
Dray S, Legendre P (2008)
Testing the species traits-environment relationships : the fourth-corner problem revisited, Ecology, vol. 89 pp.3400-3412.
Dray S , Saïd S, Débias F (2008)
Spatial ordination of vegetation data using a generalization of Wartenberg’s multivariate spatial correlation, Journal of Vegetation Science, vol. 19 pp.45-56.
Dufour A-B, Lobry JR (2008)
From W.S. Gosset`s pieces of card (1908) to R software : analysing Macdonell`s dataset of 3000 criminals, Biométrie Humaine et Anthropologie, vol. 26 pp.33-39.
Durant D, Tichit M, Fritz H, Kerneïs E (2008)
Field occupancy by breeding lapwings Vanellus vanellus and redshanks Tringa totanus in agricultural wet grasslands, Agriculture Ecosystems & Environment, vol. 128 pp.146-150.
Durant D, Tichit M, Kerneïs E, Fritz H (2008)
Management of agricultural wet grasslands for breeding waders: integrating ecological and livestock system perspectives a review, Biodiversity and Conservation, vol. 17(9) pp.2275-2295.
Fremaux B, Prigent-Combaret C, Delignette-Muller M-L, Mallen B, Dothal M, Gleizal A, Vernozy-Rozand C (2008)
Persistence of Shiga toxin-producing Escherichia coli O26 in various manure-amended soil types, Journal of Applied Microbiology, vol. 104 pp.296-304.
Hibert F, Fritz H, Poilecot P, Abdou HN, Dulieu D (2008)
Morphological criteria to identify faecal pellets of sympatric ungulates in West African savanna and estimates of associated error, Afr. J. Ecol., vol. 46 pp.523-532.
Jombart T, Devillard S, Dufour A-B, Pontier D (2008)
Revealing cryptic spatial patterns in genetic variability by a new multivariate method, Heredity, vol. 101 pp.92-103.
Le Corre M, Pellerin M, Pinaud D, Van Laere G, Fritz H, Saïd S (2008)
A multi-patch use of the habitat: testing the First-Passage Time analysis on roe deer Capreolus capreolus paths, Wildlife biology, vol. 14 pp.339-349.
Morisset S, Peyron F, Lobry JR, Garweg J, Ferrandiz J, Musset K, Gomez-Marin JE, de la Torre A, Demar M, Carme B, Mercier Co, Garin JF, Cesbron-Delauw MF (2008)
Serotyping of Toxoplasma gondii: striking homogeneous pattern between symptomatic and asymptomatic infections within Europe and South America, Microbes and Infection, vol. 10 pp.742-747.
Pelissier R, Couteron P, Dray S (2008)
Analyzing or explaining beta diversity ? comment, Ecology, vol. 89 pp.3227-3232.
Poisbleau M, Desmonts D, Fritz H (2008)
Dominance relationships in Dark-bellied Brent Geese Branta bernicla bernicla at spring staging areas, Ardea, vol. 96 pp.135-139.
Remigi P, Faye A, Kane A, Deruaz M, Thioulouse J, Cissoko M, Prin Y, Galiana A, Dreyfus B, Duponnois R (2008)
The exotic legume tree species Acacia holosericea alters microbial soil functionalities and the structure of the arbuscular mycorrhizal community, Applied and Environmental Microbiology, vol. 74 pp.1485-1493.
Storms D, Aubry P, Hamann J-L, Saïd S, Fritz H, Saint-Andrieux C, Klein F (2008)
Seasonal variation in diet composition and similarity of sympatric red deer Cervus elaphus and roe deer Capreolus capreolus, Wildlife biology, vol. 14 pp.237-250.
Valeix M, Fritz H, Chamaillé-Jammes S, Bourgarel M, Murindagomo F (2008)
Fluctuations in abundance of large herbivore populations: insights into the influence of dry season rainfall and elephant numbers from long-term data, Animal Conservation, vol. 11 pp.391-400.
Valeix M, Fritz H, Matsika R, Matsvimbo F, Madzikanda H (2008)
The role of water abundance thermoregulation perceived predation risk and interference competition in water access by African herbivores, African Journal of Ecology, vol. 46 pp.402-410.
Valery L, Fritz H, Lefeuvre J-C, Simberloff D (2008)
In search of a real definition of the biological invasion phenomenon itself, Biological Invasions, vol. 10(8) pp.1345-1351.
Andrianjaka Z, Bally R, Lepage M, Thioulouse J, Comte G, Duponnois R (2007)
Biological control of Striga hermonthica by Cubitermes termite mound powder amendment in sorghum culture, Applied Soil Ecology, vol. 37 pp.175-183.
Arzel C, Guillemain M, Gurd DB, EImberg J, Fritz H, Arnaud A, Pin C, Bosca F (2007)
Experimental functional response and inter-individual variation in foraging rate of teal (Anas crecca), Behavioural Processes, vol. 75 pp.66-71.
Blanchard P, Fritz H (2007)
Induced or routine vigilance while foraging, Oikos, vol. 116 pp.1603-1608.
Bonenfant C, Gaillard J-M, Dray S, Loison A, Royer M, Chessel D (2007)
Testing sexual segregation and aggregation: old ways are best, Ecology, vol. 88 pp.3202-3208.
Chamaillé-Jammes S, Fritz H, Holdo R (2007)
spatial relationship between elephant and sodium concentration of water disappears as density increased in Hwange National Park Zimbabwe, Journal of Tropical Ecology, vol. 23 pp.725-728.
Chamaillé-Jammes S, Fritz H, Murindagomo F (2007)
Climate-driven fluctuations in surface-water availability and the buffering role of artificial pumping in an African savanna: Potential implication for herbivore dynamics, Austral Ecology, vol. 32 pp.740-748.
Chamaillé-Jammes S, Fritz H, Murindagomo F (2007)
Detecting climate changes of concern in highly variable environments: Quantile regressions reveal that droughts worsen in Hwange National Park Zimbabwe, Journal of Arid Environments, vol. 71 pp.323-329.
Chamaillé-Jammes S, Valeix M, Fritz H (2007)
Elephant management: why can’t we throw out the babies with the artificial bathwater?, Diversity and Distributions, vol. 13 pp.663-665.
Chamaillé-Jammes S, Valeix M, Fritz H (2007)
Managing heterogeneity in elephant distribution: interactions between elephant population density and surface-water availability, Journal of Applied Ecology, vol. 44 pp.625-633.
Charif D, Lobry JR (2007)
SeqinR 1.0-2: a contributed package to the R project for statistical computing devoted to biological sequences retrieval and analysis
in: Structural approaches to sequence evolution: Molecules networks populations, Springer Verlag, pp.207-232.
Dray S, Dufour A-B (2007)
The ade4 Package: Implementing the Duality Diagram for Ecologists, Journal of Statistical Software, vol. 22 pp.1-20.
Dray S, Dufour A B, Chessel D (2007)
The ade4 Package--II: Two-table and K-table Methods, R News, vol. 7 pp.47-52.
Fleurance G, Duncan P, Fritz H, Cabaret J, Cortet J, Gordon IJ (2007)
Selection of feeding sites by horses at pasture: Testing the anti-parasite theory, Applied Animal Behaviour Science, vol. 108 pp.288-301.
Fremaux B, Prigent-Combaret C, Delignette-Muller M-L, Dothal M, Vernozy-Rozand C (2007)
Persistence of Shiga toxin-producing Escherichia coli O26 in cow slurry, Letters in applied microbiology, vol. 45 pp.55-61.
Guillemain M, Arzel C, Legagneux P , Elmberg J, Fritz H, Lepley M, Pin C , Arnaud A , Massez G (2007)
Predation risk constrains the plasticity of foraging behaviour in teals Anas crecca: a flyway-level circumannual approach, Animal Behaviour, vol. 73 pp.845-854.
Guillemain M, Arzel C, Legagneux P, Elmberg J , Fritz H , Lepley M , Pin C , Arnaud A, Massez G (2007)
Risky foraging leads to cost-free mate guarding in male teal Anas crecca, Journal of Ornithology, vol. 148 pp.251-254.
Guillemain M, Fritz H, Johnson AR , Simon G (2007)
What type of lean ducks do hunters kill? Weakest local ones rather than migrants, Wildlife Biology, vol. 13 pp.102-107.
Guillemain M, Lepley M, Fritz H, Hecker N (2007)
Marsh Harriers Circus aeruginosus target Teals Anas crecca at roosts according to potential availability of vulnerable prey, BIRD Study, vol. 54 pp.268-270.
Guillemain M, Poisbleau M, Denonfoux L, Lepley M, Moreau C, Massez G, Leray G, Caizergues A, Arzel C, Rodrigues D, Fritz H (2007)
Multiple tests of the effect of nasal saddles on dabbling ducks: combining field and aviary approaches, Bird Study, vol. 54 pp.35-45.
Kisa M, Sanon A, Thioulouse J, Assigbetse K, Sylla S, Dieng L, Berthelin J, Prin Y, Galiana A , Lepage M, Duponnois R (2007)
Arbuscular mycorrhizal symbiosis can counterbalance the negative influence of the exotic tree species Eucalyptus camaldulensis on the structure and functioning of soil microbial communities in a sahelian soil, FEMS Microbiology Ecology, vol. 62 pp.32-44.
Laloe D, Jombart T, Dufour A-B, Moazami-Goudarzi K (2007)
Consensus genetic structuring and typological value of markers using multiple co-inertia analysis, Genetics Selection Evolution, vol. 39 pp.545-567.
Lasne F, Thioulouse J, Martin L, de Ceaurriz J (2007)
Detection of recombinant human erythropoietin in urine for doping analysis: interpretation of isoelectric profiles by discriminant analysis, Electrophoresis, vol. 28 pp.1875-1881.
Necşulea A, Lobry JR (2007)
A New Method for Assessing the Effect of Replication on DNA Base Composition Asymmetry, Molecular Biology and Evolution, vol. 24 pp.2169-2179.
Necşulea A, Lobry JR (2007)
A New Method for Assessing the Effect of Replication on DNA Base Composition Asymmetry, , vol. pp.379-381.
Ouahmane L, Hafidi M, Thioulouse J, Ducousso M, Kisa M, Prin Y, Galiana A, Boumezzough A, Duponnois R (2007)
Improvement of Cupressus atlantica Gaussen growth by inoculation with native arbuscular mycorrhizal fungi, Journal of Applied Ecology, vol. 103 pp.683-690.
Ouahmane L, Thioulouse J, Hafidi M, Prin Y, Galiana A, Plenchette C, Kisa M, R Duponnois (2007)
Soil functional diversity and P solubilization from rock phosphate after inoculation with native or allochtonous arbuscular mycorrhizal fungi, Forest Ecology and Management, vol. 241 pp.200-208.
Poisbleau M, Dalloyau S, Fritz H, Bost C-A, Ebbinge B-S (2007)
Brent goose Branta bernicla bernicla feeding behaviour durin incubation Taïmyr Perinsula Russia, Polar Biology, vol. 30 pp.1343-1349.
Pouillot R, Miconnet N, Afchain A-L, Delignette-Muller M-L, Beaufort A, Rosso L, Denis J-B, Cornu M (2007)
Quantitative Risk Assessment of Listeria monocytogenes in French Cold-Smoked Salmon: I. Quantitative Exposure Assessment, Risk Analysis, vol. 27 pp.806-819.
Ramanankierana N, Ducousso M, Rakotoarimanga N, Prin Y, Thioulouse J, Randrianjohany E, Ramaroson L, Kisa M, Galiana A, Duponnois R (2007)
Arbuscular mycorrhizas and ectomycorrhizas of Uapaca bojeri L. (Euphorbiaceae): sporophore diversity patterns of root colonization and effects on seedling growth and soil microbial catabolic diversity, Mycorrhiza, vol. 17 pp.195-208.
Thioulouse J, Dray S (2007)
Interactive Multivariate Data Analysis in R with the ade4 and ade4TkGUI Packages, Journal of Statistical Software, vol. 22 pp.1-14.
Valeix M, Chamaillé-Jammes S, Fritz H (2007)
Interference competition and temporal niche shifts: elephants and herbivore communities at waterholes, Oecologia, vol. 153 pp.739-748.
Valeix M, Fritz H, Dubois S, Kanengoni K, Alleaume S, Saïd S (2007)
Vegetation structure and ungulate abundance over a period of increasing elephant abundance in Hwange National Park Zimbabwe, Journal of Tropical Ecology, vol. 23 pp.87-93.
Vimont A, Delignette-Muller M-L, Vernozy-Rozand C (2007)
Supplementation of enrichment broths by novobiocin for detecting Shiga toxin-producing Escherichia coli from food: a controversial use, Letters in applied microbiology, vol. 44 pp.326-331 .
Vimont A, Vernozy-Rozand C, Montet M-P, Bavai C, Fremaux B, Delignette-Muller M-L (2007)
Growth of Shiga-Toxin producing Escherichia coli (STEC) and bovine feces background microflora in various enrichment protocols, Veterinary Microbiology, vol. 123 pp.274-281.
Agreil C, Meuret M, Fritz H (2006)
Adjustement of feeding choices and intake by a ruminant foraging in varied and variable environments: new insights from continous bite monitoring
in: CAB International, , pp.302-325.
Bel-Venner MC, Venner S (2006)
Mate-guarding strategies and male competitive ability: results from a field study in an orb-weaving spider, Animal Behaviour, vol. 71 pp.1315-1322.
Blanc R, Guillemain M, Mouronval JB, Desmonts D, Fritz H (2006)
Effects of non-consumptive leisure disturbance to wildlife, Revue d`Ecologie - La terre et la vie, vol. 61(2) pp.117-133.
Calenge C, Dufour A-B (2006)
Eigenanalysis of selection ratios from animal radio-tracking data, Ecology, vol. 87 pp.2349-2355.
Chamaillé-Jammes S, Fritz H, Murindagomo F (2006)
Spatial patterns of the NDVI–rainfall relationship at the seasonal and interannual time scales in an African savanna, International Journal of Remote Sensing, vol. 27 pp.5185-5200.
Cornu M, Beaufort A, Rudelle S, Laloux L, Bergis H, Miconnet N, Serot T, Delignette-Muller M-L (2006)
Effect of temperature water-phase salt and phenolic contents on Listeria monocytogenes growth rates on cold-smoked salmon and evaluation of secondary models, International Journal of Food Microbiology, vol. 106 pp.159-168.
Culhane AC, Thioulouse J (2006)
A multivariate approach to integrating Datasets using made4 and ade4, R News, vol. pp.1-15.
Delignette-Muller M-L, Cornu M, Pouillot R, Denis J-B (2006)
Use of Bayesian modelling in risk assessment: Application to growth of Listeria monocytogenes and food flora in cold-smoked salmon, International journal of food microbiology, vol. 106 pp.195-208.
Diallo MD, Duponnois R, Guisse A, Sall S, Chotte J-L, Thioulouse J (2006)
Biological effects of native and exotic plant residues on plant growth microbial biomass and N availability under controlled conditions, European Journal of Soil Biology, vol. 42 pp.238-246.
Dray S, Legendre P, Peres-Neto PR (2006)
Spatial modelling : a comprehensive framework for principal coordinate analysis of neighbour matrices (PCNM), Ecological Modelling, vol. pp.483-493.
Dufour A-B, Pavoine S, Chessel D (2006)
Exemple de démarche biométrique : une étude de la variabilité génétique humaine par la double analyse en coordonnées principales, Biométrie Humaine et Anthropologie, vol. 24 pp.5-11.
Duponnois R, Assikbetse K, Ramanankierana H, Kisa M, Thioulouse J, Lepage M (2006)
Litter-forager termite mounds enhance the ectomycorrhizal symbiosis between Acacia holosericea A. Cunn. Ex G. Don and Scleroderma dictyosporum isolates, FEMS Microbiology Ecology, vol. 56 pp.292-303.
Duponnois R, Kisa M, Assigbetse K, Prin Y, Thioulouse J, Issartel M, Moulin P, Lepage M (2006)
Fluorescent pseudomonads occurring in Macrotermes subhyalinus mound structures decrease Cd toxicity and improve its accumulation in sorghum plants, Science of the Total Environment, vol. 370 pp.391-400.
Durant D, Fritz H (2006)
Variation of pecking rate with sward height in wild wigeon Anas penelope, Journal of Ornithology, vol. 147 pp.367-370.
Durant D, Kersten M, Fritz H, Juin H, Lila M (2006)
Constraints of feeding on Salicornia ramosissima by wigeon Anas penelope : an experimental approach, Journal of Ornithology, vol. 147 pp.1-12.
Fremaux B, Delignette-Muller M-L, Prigent-Combaret C, Gleizal A, Vernozy-Rozand C (2006)
Growth and survival of non-O157:H7 Shiga-toxin-producing Escherichia coli in cow manure, Journal of Applied Microbiology, vol. 102 pp.89-99.
Fritz H, Loison A (2006)
Large Herbivores across Biomes. Large Herbivore Ecology Ecosystem Dynamics and Conservation
in: Conservation Biology, Cambridge University Press, pp.19-49.
Gaidet-Drapier N, Fritz H, Bourgarel M, Renaud P-C, Poilecot P, Chardonnet P, Coid C, Poulet D, Bel S (2006)
Cost and Efficiency of Large Mammal Census Techniques: Comparison of Methods for a Participatory Approach in a Communal Area Zimbabwe, Biodiversity and Conservation, vol. 15 pp.735-754.
Jombart T, Moazami-Goudarzi K, Dufour A-B, Laloë D (2006)
Fréquences alléliques et cohérence entre marqueurs moléculaires : des outils descriptifs, Les actes du Bureau des Ressources Génétiques, vol. 6 pp.25-39.
Le Hesran JY, Fievet N, Thioulouse J, Personne P, Maubert B, M`bidias S, Etye`ale D, Cot M, Deloron P (2006)
Development of cellular immune responses to Plasmodium falciparum blood stage antigens from birth to 36 months of age in Cameroon, Acta Tropica, vol. 98 pp.261-269.
Le Roux X , Leriche H, Abbadie L , Fritz H (2006)
Modification of the savanna functioning by herbivores
in: Structure function and dynamics of a savanna ecosystem, Springer-Verlag, pp.185-200.
Lobry JR, Necşulea A (2006)
Synonymous codon usage and its potential link with optimal growth temperature in prokaryotes., Gene, vol. 385 pp.128-136.
Necşulea A, Lobry JR (2006)
Revisiting the directionnal mutation pressure theory : The analysis of a particular genomic structure in Leishmania major, Gene, vol. 385 pp.28-40.
Ouahmane L, Duponnois R, Hafidi M, Kisa M, Boumezzough A, Thioulouse J, Plenchette C (2006)
Some Mediterranean plant species (Lavandula spp. and Thymus satureioides) act as potential `plant nurses` for the early growth of Cupressus atlantica, Plant Ecology, vol. 185 pp.123-134.
Ouahmane L, Hafidi M, Plenchette C, Kisa M, Boumezzough A, Thioulouse J, Duponnois R (2006)
Lavandula species as accompanying plants in Cupressus replanting strategies : Effect on plant growth mycorrhizal soil infectivity and soil microbial catabolic diversity, Applied Soil Ecology, vol. pp.190-199.
Palmeira L, Guéguen L, Lobry JR (2006)
UV-Targeted Dinucleotides Are Not Depleted in Light-Exposed Prokaryotic Genomes, Molecular Biology and Evolution, vol. 23 pp.2214-2219.
Peres-Neto PR, Legendre P, Dray S, Borcard D (2006)
Variation partitioning of species data matrices : estimation and comparaison of fractions, Ecology, vol. 87 pp.2614-2625.
Peyron F, Lobry JR, Musset K, Ferrandiz J, Gómez-Marín J E, Petersen E, Meroni V, Rausher B, Mercier CO, Picot S, Cesbron-Delauw MF (2006)
Serotyping of Toxoplasma gondii in chronically infected pregnant women : predominance of type II in Europe and types I and III in Colombia (South America), Microbes and Infection, vol. 8 pp.2333-2340.
Poisbleau M, Fritz H, Dano S, Lambrechts MM (2006)
Body measurements and hormonal within-pair covariation in wintering and spring staging Dark-bellied Brent Geese Branta bernicla bernicla, Ardéa, vol. 94 pp.127-131.
Poisbleau M, Fritz H, Lambrechts MM, Trouve C, Ebbinge BS (2006)
Changes in body mass and hormone levels between wintering and spring staging areas in dark-bellied brent geese Branta bernicla bernicla, Journal of Avian Biology, vol. 37 pp.143-148.
Poisbleau M, Fritz H, Valeix M, Perroi P-Y, Dalloyau S, Lambrechts M (2006)
Social dominance correlates and family status in wintering dark-bellied brent geese Branta bernicla bernicla, Animal Behaviour, vol. 71 pp.1351-1358.
Poisbleau M, Jenouvrier S, Fritz H (2006)
Assessing the reliability of dominance scores for assigning individual ranks in a hierarchy, Animal Behaviour, vol. 72 pp.835-842.
Portier P, Fischer-Le Saux M, Mougel C, Lerondelle C, Chapulliot D, Thioulouse J, Nesme X (2006)
Identification of genomic species in Agrobacterium biovar 1 by AFLP genomic markers., Applied and Environmental Microbiology, vol. 72 pp.7123-7131.
Ramanankierana N, Rakotoarimanga N, Thioulouse J, Marija K, Randrianjohany E, Ramaroson L, Duponnois R (2006)
The Ectomycorrhizosphere Effect Influences Functional Diversity of Soil Microflora, International Journal of Soil Sciences, vol. 1 pp.8-19.
Sanguin H, Remenat B, Dechesne A, Thioulouse J, Vogel TM, Nesme X, Moënne-Loccoz Y, Grundmann GL (2006)
Potential of 16S rRNA-Based Taxonomic Microarray for Analyzing the Rhizosphere Effects of Maize on Agrobacterium spp. and Bacterial Communities, Applied and Environmental Microbiology, vol. 72 pp.4302-4312.
Sanon A, Martin P, Thioulouse J, Plenchette C, Spichiger R, Lepage M, Duponnois R (2006)
Displacement of an herbaceous plant species community by mycorrhizal and non-mycorrhizal Gmelina arborea an exotic tree grown in a microcosm experiment, Mycorrhiza, vol. 16 pp.125-132.
Sémon M, Lobry JR, Duret L (2006)
No Evidence for Tissue-Specific Adaptation of Synonymous Codon Usage in Humans, Molecular Biology and Evolution, vol. 23 pp.523-529.
Storms D, Saïd S, Fritz H, Hamann J-L, Saint Andrieux C, Klein F (2006)
Influence of hurricane Lothar on red an roe deer winter diets in the Northern Vosges France, Forest Ecology and Management, vol. 237 pp.164-169.
Tall L, Cattaneo A, Cloutier L, Dray S, Legendre P (2006)
Resource partitioning in a grazer guild feeding on a multilayer diatom mat, Journal of the North American Benthological Society, vol. 25 pp.800-810.
Thévenot D, Delignette-Muller M-L, Christieans S, Leroy S, Kodjo A, Vernozy-Rozand C (2006)
Serological and molecular ecology of Listeria monocytogenes isolates collected from 13 French pork meat salting–curing plants and their products, International Journal of Food Microbiology, vol. 112 pp.341-342.
Venner S, Chadès I, Bel-Venner MC, Pasquet A, Charpillet F, Leborgne R (2006)
Dynamic optimization over infinite-time horizon : web-building strategy in an orb-weaving spider as a case study, Journal of Theoretical Biology, vol. pp.725-733.
Vimont A, Vernozy-Rozand C, Delignette-Muller M-L (2006)
Isolation of E. coli O157:H7 and non-O157 STEC in different matrices: review of the most commonly used enrichment protocols, Letters in Applied Microbiology, vol. 42 pp.102-108.
Vimont A, Vernozy-Rozand C, Montet M-P, Lazizzera C, Bavai C, Delignette-Muller M-L (2006)
Modeling and Predicting the Simultaneous Growth of Escherichia coli O157:H7 and Ground Beef Background Microflora for Various Enrichment Protocols, Applied and environmental microbiology, vol. 72 pp.261-268.
Agreil C, Fritz H, Meuret M (2005)
Maintenance of daily intake through bite mass diversity adjustment in sheep grazing on heterogeneous and variable vegetation, Applied Animal Behaviour Science, vol. 91 pp.35-36.
Assigbetse K, Gueye M, Thioulouse J, Duponnois R (2005)
Soil bacterial diversity responses to root colonization by an ectomycorrhizal fungus are not root-growth dependent, Microbial Ecology, vol. 50 pp.350-359.
Cadet P, Masse D, Thioulouse J (2005)
Relationships between plant-parasitic nematode community fallow duration and soil factors in the Sudano-Sahelian area of Senegal, Agriculture Ecosystems & Environment, vol. 108 pp.302-317.
Calenge C, Dufour A-B, Maillard D (2005)
K-select analysis: a new method to analyse habitat selection in radio-tracking studies, Ecological Modelling, vol. 186 pp.143-153.
Charif D, Thioulouse J, Lobry JR, Perrière G (2005)
Online synonymous codon usage analyses with the ade4 and seqinR packages, Bioinformatics, vol. 21 pp.545-547.
Culhane AC, Thioulouse J, Perrière G, Higgins DG (2005)
MADE4: an R package for multivariate analysis of gene expression data, Bioinformatics, vol. 21 pp.2789-2790.
De Palma C, Viggiano E, Barillari E, Palme R, Dufour A-B, Fantini C, Natoli E (2005)
Evaluating the temperament in shelter dogs, Journal of Behavior, vol. 142 pp.1307-1328.
Delignette-Muller M-L, Baty F, Cornu M, Bergis H (2005)
Modelling the effect of a temperature shift on the lag phase duration of Listeria monocytogenes, International Journal of Food Microbiology, vol. 100 pp.77-84 .
Duponnois R, Colombet A, Hien V, Thioulouse J (2005)
The mycorrhizal fungus Glomus intraradices and rock phosphate amendment influence plant growth and microbial activity in the rhizosphere of Acacia holosericea, Soil Biology and Biochemistry, vol. 37 pp.1460-1468.
Duponnois R, Paugy M, Thioulouse J, Masse D, Lepage M (2005)
Functional diversity of soil microbial community rock phosphate dissolution and growth of Acacia seyal as influenced by grass- litter- and soil-feeding termite nest structure amendments, Geoderma, vol. 124 pp.349-361.
Duriez O, Ferrand Y, Binet F, Corda E, Gossmann F, Fritz H (2005)
Habitat selection of the Eurasian woodcock in winter in relation to earthworms availability, Biological Conservation, vol. 122 pp.479-490.
Duriez O, Fritz H, Binet F, Tremblay Y, Ferrand Y (2005)
Individual activity rates in wintering Eurasian woodcocks: starvation versus predation risk trade-off?, Animal Behaviour, vol. 69 pp.39-49.
Duriez O, Fritz H, Saïd S, Ferrand Y (2005)
Wintering behaviour and spatial ecology of Eurasian Woodcock Scolopax rusticola in western France, Ibis, vol. 147 pp.519-532.
Fleurance G, Duncan P, Fritz H, Cabaret J, Gordon IJ (2005)
Importance of nutritional and anti-parasite strategies in the foraging decisions of horses: an experimental test, Oikos, vol. 110 pp.602-612.
Haguenauer M, Fargier P, Legreneur P, Dufour A-B, Cogerino G, Begon M, Monteil KM (2005)
Short-term effects of using verbal instructions and demonstration at the beginning of learning a complex skill in figure skating., Perceptual and Motor Skills, vol. 100 pp.179-191.
Lamy B, Carret G, Flandrois J-P, Delignette-Muller M-L (2005)
De la prévalence aux valeurs prédictives: L`antibiogramme face à l`évolution de la résistance aux antibiotiques, Annales de Biologie Clinique (Paris), vol. 63 pp.493-502.
Pavoine S, Ollier S, Dufour A-B (2005)
Is the originality of a species measurable ?, Ecology Letters, vol. 8 pp.579-586.
Pettorelli N, Dray S, Maillard D (2005)
Coupling principal component analysis and GIS to map deer habitats, Wildlife Biology, vol. 11 pp.363-370.
Poisbleau M, Fritz H, Guillemain M, Lacroix A (2005)
Testosterone and linear social dominance status in captive male dabbling ducks in winter, Ethology, vol. 111 pp.493-509.
Poisbleau M, Fritz H, Guillon N, Chastel O (2005)
Linear social dominance hierarchy and corticosterone responses in male mallards and pintails, Hormones and Behavior, vol. 47 pp.485-492.
Saïd S, Pellerin M, Guillon N, Débias F, Fritz H (2005)
Assessment of forage availability in ecological studies, European Journal of Wildlife Research, vol. 51 pp.242-247.
Thévenot D, Delignette-Muller M-L, Christieans S, Vernozy-Rozand C (2005)
Prevalence of Listeria monocytogenes in 13 dried sausage processing plants and their products, International Journal of Food Microbiology, vol. 102 pp.85-94.
Thévenot D, Delignette-Muller M-L, Christieansa S, Vernozy-Rozand C (2005)
Fate of Listeria monocytogenes in experimentally contaminated French sausages, International Journal of Food Microbiology, vol. 101 pp.189-200.
Venner S, Casas J (2005)
Spider webs designed for rare but life-saving catches, Proceedings of The Royal Society B-Biological Sciences, vol. 272 pp.1587-1592.
Zagordi O, Lobry JR (2005)
Forcing reversibility in the no-strand-bias substitution model allows for the theoretical and practical identifiability of its 5 parameters from pairwise DNA sequence comparisons, Gene, vol. 347 pp.175-182.
Batya F, Delignette-Muller M-L (2004)
Estimating the bacterial lag time: which model which precision ?, International Journal of Food Microbiology, vol. 91 pp.261-277.
Chessel D, Dufour A-B, Thioulouse J (2004)
The ade4 package - I : One-table methods, R News, vol. 4 pp.5-10.
de Garine-Wichatitsky M, Fritz H, Gordon IJ, Illius AW (2004)
Bush selection along foraging pathways by sympatric impala and greater kudu, Oecologia, vol. 141 pp.66-75.
De Palma C, Viggiano E, Barillari E, Palme R, Dufour A-B, Fantini C, Natoli E (2004)
Osservazioni etologiche per determinare il temperamento di cani residenti nel pubblico canile e ospedale veterinario, Il Progresso Veterinario, vol. 11 pp.412-414.
Duriez O, Pastout-Lucchini L, Boos M, Chastel O, Fritz H, Ferrand Y, Clobert J (2004)
Low levels of energy expenditure in a nocturnal forest-dwelling wader the Eurasian Woodcock Scolopax rusticola, Ardéa, vol. 92 pp.31-42.
Guillemain M, Fritz H, Klaassen M, Johnson AR, Hafner H (2004)
Fuelling rates of garganey (Anas querquedula) staging in the Camargue southern France during spring migration, Journal of Ornithology, vol. 145 pp.152-158.
Lamy B, Carret G, Flandrois J-P, Delignette-Muller M-L (2004)
How does susceptibility prevalence impact on the performance of disk diffusion susceptibility testing?, Diagnostic Microbiology and Infectious Disease, vol. 49 pp.131-139.
Lamy B, Delignette-Muller M-L, Baty F, Carret G (2004)
Simple table for estimating confidence interval of discrepancy frequencies in microbiological safety evaluation, Journal of Microbiological Methods, vol. 56 pp.137-139.
Lobry JR (2004)
Life history traits and genome structure: aerobiosis and G+C content in bacteria, Lecture Notes in Computer Sciences, vol. 3039 pp.679-686.
Naizot T, Auda Y, Dervieux A, Thioulouse J, Bellan MF (2004)
Une nouvelle analyse multi-temporelle d`images satellitales les residus de l`Analyse en Composantes Principales. Un cas d`etude: une serie d`images Landsat Thematic Mapper de la Camargue France., International Journal of Remote Sensing, vol. 25 pp.1925-1938.
Pavoine S, Dufour A-B, Chessel D (2004)
From dissimilarities among species to dissimilarities among communities: A Double Principal Coordinate Analysis, Journal of Theoretical Biology, vol. 228 pp.523-537.
Thioulouse J, Simier M, Chessel D (2004)
Simultaneous analysis of a sequence of paired ecological tables with the STATICO method, Ecology, vol. 85 pp.272-283.
Bret C, Messonnier L, Nouck Nouck JM, Freund H, Dufour A-B, Lacour JR (2003)
Differences in Lactate exchange and removal abilities in athletes specialised in different Track Running Events (100m to 1500m), International Journal of Sports Medicine, vol. 24 pp.108-113.
Cadet P, Pate E, Thioulouse J (2003)
Relationship of nematode communities to human demographics and environment in agricultural fields and fallow lands in Senegal., Journal of Tropical Ecology, vol. 19 pp.279-290.
Dray S, Chessel D, Thioulouse J (2003)
Co-inertia analysis and the linking of ecological tables, Ecology, vol. 84 pp.3078-3089.
Dray S, Chessel D, Thioulouse J (2003)
Procustean co-inertia analysis for the linking of multivariate datasets, Ecoscience, vol. 10 pp.110-119.
Dray S, Pettorelli N, Chessel D (2003)
Multivariate analysis of incomplete mapped data, Transactions in GIS, vol. 7 pp.411-422.
Durant D, Fritz H, Blais S, Duncan P (2003)
The functional response in three species of herbivorous Anatidae: effects of sward height body mass and bill size, Journal of Animal Ecology, vol. 72 pp.220-231.
Durant D, Fritz H, Duncan P (2003)
Feeding patch selection by herbivorous Anatidae: the influence of body size and of plant quantity and quality, Journal of Avian Biology, vol. 35 pp.144-152.
Fritz H, Said S, Renaud PC, Mutake S, Coid C, Monicat F (2003)
The effects of agricultural fields and human settlements on the use of rivers by wildlife in the mid-Zambezi valley Zimbabwe, Landscape Ecology, vol. 18 pp.293-302.
Fritz H, Said S, Weimerskirch H (2003)
Scale-dependent hierarchical adjustments of movement patterns in a long-range foraging seabird, Proceedings of The Royal Society B-Biological Sciences, vol. 270 pp.1143-1148.
Gaidet N, Fritz H, Nyahuma C (2003)
A participatory counting method to monitor populations of large mammals in non-protected areas: a case study of bicycle counts in the Zambezi Valley Zimbabwe, Biodiversity and Conservation, vol. 12 pp.1571-1585.
Gimaret-Carpentier C, Dray S, Pascal J-P (2003)
Broad-scale biodiversity pattern of the endemic tree flora of the Western Ghats (India) using canonical correlation analysis of herbarium records, Ecography, vol. 26 pp.429-444.
Lobry JR, Chessel D (2003)
Internal correspondence analysis of codon and amino-acid usage in thermophilic bacteria, Journal of Applied Genetics, vol. 44 pp.235-261.
Lobry JR, Louarn JM (2003)
Polarisation of prokaryotic chromosomes, Current Opinion in Microbiology, vol. 6 pp.101-108.
Ollier S, Chessel D, Couteron P, Pélissier R, Thioulouse J (2003)
Comparing and classifying one-dimensional spatial patterns: an application to laser altimeter profiles., Remote Sensing of Environment, vol. 85 pp.453-462.
Pélissier R, Couteron P, Dray S, Sabatier D (2003)
Consistency between ordination techniques and diversity measurements: two alternative strategies for species occurrence data, Ecology, vol. 84 pp.242-251.
Perrière G, Combet C, Penel S, Blanchet C, Thioulouse J, Geourjon C, Grassot J, Charavay C, Gouy M, Duret L, Deléage G (2003)
Integrated databanks access and sequence/structure analysis services at the PBIL., Nucleic Acids Research, vol. 31 pp.3393-3399.
Perrière G, Thioulouse J (2003)
Use of Correspondence Discriminant Analysis to predict the subcellular location of bacterial proteins, Computer Methods and Programs in Biomedicine, vol. 70 pp.99-105.
Pettorelli N, Dray S, Gaillard J-M, Chessel D, Duncan P, Illius A, Guillon N, Klein F, Van Laere G (2003)
Spatial variation in springtime food resources influences the winter body mass of roe deer fawns., Oecologia, vol. 137 pp.363-369.
Venner S, Bel-Venner MC, Pasquet A, Leborgne R (2003)
Body mass-dependent cost of web-building behaviour in an orb weaving spider Zygiella x-notata, Naturwissenschaften, vol. 90 pp.269-272.
Vogel J, Normand P, Thioulouse J, Nesme X, Grundmann G (2003)
Relationship between spatial and genetic distance in Agrobacterium spp. in 1 cubic centimeter of soil., Applied and Environmental Microbiology, vol. 69 pp.1482-1487.
Baty F, Flandrois J-P, Delignette-Muller M-L (2002)
Modeling the Lag Time of Listeria monocytogenes from Viable Count Enumeration and Optical Density Data, Applied and environmental microbiology, vol. 68 pp.5816-5825.
Bourdin M, Sallet P, Dufour A-B, Lacour JR (2002)
Influence of changes in nasal ventilation on workload during submaximal field running, Journal of Sports Medicine and Physical Fitness, vol. 42 pp.495-499.
Bourgarel M, Fritz H, Gaillard J-M, De Garine-Wichatitsky M, Maudet F (2002)
Effects of annual rainfall and habitat types on the body mass of Impala (Aepyceros melampus) in the Zambezi Valley Zimbabwe., African Journal of Ecology, vol. 40 pp.186-193.
Bret C, Rahmani A, Dufour A-B, Messonnier L, Lacour JR (2002)
Leg strength and stiffness as ability factors in 100-m sprint running, Journal of Sports Medicine and Physical Fitness, vol. 42 pp.274-281.
Dray S, Pettorelli N, Chessel D (2002)
Matching data sets from two different spatial samples, Journal of Vegetation Science, vol. 13 pp.867-874.
Founoune H, Duponnois R, Meyer JM, Thioulouse J, Masse D, Chotte J-L, Neyra M (2002)
Interactions between ectomycorrhizal symbiosis and fluorescent pseudomonads on Acacia holosericea: isolation of mycorrhiza helper bacteria (MHB) from a Soudano-Sahelian soil, FEMS Microbiology Ecology, vol. 41 pp.37-46.
Guillemain M, Fritz H, Duncan P (2002)
Foraging strategies of granivorous dabbling ducks wintering in protected areas of the French Atlantic coast, Biodiversity and Conservation, vol. 11 pp.1721-1732.
Guillemain M, Fritz H, Duncan P (2002)
The importance of protected areas as nocturnal feeding grounds for dabbling ducks wintering in western France, Biological Conservation, vol. 103 pp.183-198.
Guillemain M, Martin GR, Fritz H (2002)
Feeding methods visual fields and vigilance in dabbling ducks (Anatidae), Functional Ecology, vol. 16 pp.522-529.
Jarraud S, Mougel C, Thioulouse J, Lina G, Meugnier H, Forey F, Nesme X, Etienne J, Vandenesch F (2002)
Relationships between Staphylococcus aureus genetic background virulence factors agr groups (alleles) and human disease., Infection and Immunity, vol. 70 pp.631-641.
Lamy B, Roy P, Carret G, Flandrois J-P, Delignette-Muller M-L (2002)
What is the relevance of obtaining multiple blood samples for culture? A comprehensive model to optimize the strategy for diagnosing bacteremia, Clinical Infectious Diseases, vol. 35 pp.842-850.
Lobry JR, Sueoka N (2002)
Asymmetric directional mutation pressures in bacteria, Genome Biology, vol. 26 pp.1-14.
Messonnier L, Freund H, Denis C, Dormois D, Dufour A-B, Lacour JR (2002)
Time to exhaustion is related to lactate exchange and removal abilities, International Journal of Sports Medicine, vol. 23 pp.433-438.
Michel JF, Dray S, de La Rocque S, Desquesnes M, Solano P, De Wispelaere G, Cuisance D (2002)
Modelling bovine trypanosomosis spatial distribution by GIS in an agro-pastoral zone of Burkina Faso, Preventive veterinary medicine, vol. 56 pp.5-18.
Mougel C, Thioulouse J, Perrière G, Nesme X (2002)
A mathematical method for determining genome divergence and species delineation using AFLP, International Journal of Systematic and Evolutionary Microbiology, vol. 52 pp.573-586.
Pélissier R, Dray S, Sabatier D (2002)
Within-plot relationships between tree species occurrences and hydrological soil constraints: an example in French Guiana investigated through canonical correlation analysis, Plant Ecology, vol. 162 pp.143-156.
Perrière G, Thioulouse J (2002)
Use and misuse of correspondence analysis in codon usage studies, Nucleic Acids Research, vol. 30 pp.4548-4555.
Pontier D, Say L, Débias F, Bried J, Thioulouse J, Micol T, Natoli E (2002)
The diet of feral cats (Felis catus L.) at five sites on the Grande Terre Kerguelen archipelago., Polar Biology, vol. 25 pp.833-837.
Vourc`h G, De Garine-Wichatitsky M, Labbe A, Rosolowski D, Martin JL, Fritz H (2002)
Monoterpene effect on feeding choice by deer, Journal of Chemical Ecology, vol. 28 pp.2411-2427.
Duponnois R, Plenchette C, Thioulouse J, Cadet P (2001)
Mycorrhizal soil infectivity and AM fungal spore communities of different aged fallows in Senegal, Applied Soil Ecology, vol. 17 pp.239-251.
Gonthier A, Guérin-Faublée V, Tilly B, Delignette-Muller M-L (2001)
Optimal growth temperature of O157 and non-O157 Escherichia coli strains, Letters in Applied Microbiology, vol. 33 pp.352-356 .
Mougel C, Teyssier S, d`Angelo C, Groud K, Neyra M, Sidi-Boumedine K, Cloeckaert A, Peloille M, Baucheron S, Chaslus-Dancla E, Jarraud S, Meugnier H, Forey F, Vandenesch F, Lina G, Etienne J, Thioulouse J, Manceau C, Robbe P, Nalin R, Briolay J, Nesme X (2001)
Experimental and theoretical evaluation of typing methods based upon random amplification of genomic restriction fragments (AFLP) for bacterial population genetics, Genetics Selection Evolution, vol. 33 pp.S319-S338 .
Ranjard L, Poly F, Lata J C, Mougel C, Thioulouse J, Nazaret S (2001)
Characterization of bacterial and fungal soil communities by automated ribosomal intergenic spacer analysis fingerprints: biological and methodological variability, Applied and Environmental Microbiology, vol. 67 pp.4479-4487.
Venner S, Thevenard L, Pasquet A, Leborgne R (2001)
Estimation of the Web`s capture thread lenght in orb-weaving spiders: determining the most efficient formula., Annals of the Entomological Society of America, vol. 94 pp.490-496.
Acot P, Charles S, Delignette-Muller M-L (2000)
Artificial intelligence and meaning--some philosophical aspects of decision-making, Acta Biotheoretica, vol. 48 pp.173-179.
Cirio A, Méot F, Delignette-Muller M-L, Boivin R (2000)
Determination of parotid urea secretion in sheep by means of ultrasonic flow probes and a multifactorial regression analysis, American Society of Animal Science, vol. 78 pp.471-476.
Delignette-Muller M-L, Rosso L (2000)
Biological variability and exposure assessment, International Journal of Food Microbiology, vol. 58 pp.203-212.
Di Marin GC, Dufour A-B (2000)
L’evoluzione delle nuove prove di educazione fisica e sportiva all’esame di maturità : cambiamento o continuita ? Athletica, Ricerca in Scienze dello sport, vol. 162 pp.32-38.
Duponnois R, Fargette M, Fould S, Thioulouse J, Davies KG (2000)
Diversity of the bacterial hyperparasite Pasteuria penetrans in relation to the control of root-knot nematodes (Meloidogyne spp.) on Acacia holosericea, Nematology, vol. 2 pp.435-442.
Duponnois R, Founoune H, Lesueur D, Thioulouse J, Neyra M (2000)
Ectomycorrhization of six Acacia auriculiformis provenances from Australia Papua New Guinea and Senegal in glasshouse conditions: effect on the plant growth and on the multiplication of plant parasitic nematodes, Australian Journal of Experimental Agriculture, vol. 40 pp.443-450.
Frank AC, Lobry JR (2000)
Oriloc: prediction of replication boundaries in unannotated bacterial chromosomes, Bioinformatics, vol. 16 pp.560-561.
Guillemain M, Fritz H, Blais S (2000)
Foraging methods can affect patch choice: an experimental study in Mallard (Anas platyrhynchos), Behavioural Processes, vol. 50 pp.123-129.
Manlay R, Cadet P, Thioulouse J, Chotte JL (2000)
Relationships between abiotic and biotic soil properties during fallow periods in the sudanian zone of Senegal, Applied Soil Ecology, vol. 14 pp.89-101.
Pate E, Ndiaye-Faye N, Thioulouse J, Villenave C, Bongers T, Cadet P, Debouzie D (2000)
Successional trends in the characteristics of soil nematodes communities in cropped and fallow lands in Senegal (Sonkorong), Applied Soil Ecology, vol. 14 pp.5-15.
Picardeau M, Lobry JR, Hinnebusch B J (2000)
Analyzing DNA strand compositional asymmetry to identify candidate replication origins of Borrelia burgdorferi linear and circular plasmids, Genome Research, vol. 10 pp.1594-1604.
Ranjard L, Nazaret S, Gourbiere F, Thioulouse J, Linet P, Richaume A (2000)
A soil microscale study to reveal the heterogeneity of Hg(II) impact on indigenous bacteria by quantification of adapted phenotypes and analysis of community DNA fingerprints, FEMS Microbiology Ecology, vol. 31 pp.107-115.
Ranjard L, Poly F, Combrisson J, Richaume A, Gourbiere F, Thioulouse J, Nazaret S (2000)
Heterogeneous Cell Density and Genetic Structure of Bacterial Pools Associated with Various Soil Microenvironments as Determined by Enumeration and DNA Fingerprinting Approach (RISA), Microbial Ecology, vol. 39 pp.263-272.
Reynaud PA, Thioulouse J (2000)
Identification of birds as biological markers along a neotropical urban-rural gradient using co-inertia analysis, Journal of Environmental Management, vol. 59 pp.121-140.
Venner S, Pasquet A, Leborgne R (2000)
Web-building behavior in an orb-weaving spider Zygiella x-notata: influence of experience, Animal Behaviour, vol. pp.603-611.
Charles H, Mouchiroud D, Lobry JR, Goncalves I, Rahbe Y (1999)
Gene size reduction in the bacterial aphid endosymbiont Buchnera, Molecular Biology and Evolution, vol. 16 pp.1820-1822.
Cornu M, Delignette-Muller M-L, Flandrois J-P (1999)
Characterization of Unexpected Growth of Escherichia coli O157:H7 by Modeling, Applied and environmental microbiology, vol. 65 pp.5322-5327.
Duponnois R, Senghor K, Thioulouse J, Ba A (1999)
Susceptibility of several sahelian Acacia to Meloidogyne javanica (Treub) Chitw, Agroforestry Systems, vol. 46 pp.123-130.
Frank AC, Lobry JR (1999)
Asymmetric substitution patterns: a review of possible underlying mutational or selective mechanisms, Gene, vol. 238 pp.65-77.
Kano-Sueoka T, Lobry JR, Sueoka N (1999)
Intra-strand biases in bacteriophage T4 genome, Gene, vol. 238 pp.59-64.
Lobry JR (1999)
Genomic landscapes, Microbiology Today, vol. 26 pp.164-165.
Lobry JR (1999)
A nice wrong model for the evolution of DNA base frequencies, Physica A, vol. 273 pp.99-102.
Lobry JR, Lobry C (1999)
Evolution of DNA base composition under no-strand-bias conditions when the substitution rates are not constant, Molecular Biology and Evolution, vol. 16 pp.719-723.
Picardeau M, Lobry JR, Hinnebusch B J (1999)
Physical mapping of an origin of bidirectional replication at the centre of the Borrelia burgdorferi linear chromosome, Molecular Microbiology, vol. 32 pp.437-445.
Taïar R, Sagnes P, Henry C, Dufour A-B, Rouard AH (1999)
Hydrodynamics optimisation in butterfly swimming : position drag coefficient and performance, Journal of Biomechanics, vol. 32 pp.803-810.
Cadet P, Thioulouse J (1998)
Identification of soil factors that relate to the structure of the plant parasitic nematode community, Applied Soil Ecology, vol. 8 pp.35-49.
Delignette-Muller M-L (1998)
Relation between the generation time and the lag time of bacterial growth kinetics, International Journal of Food Microbiology, vol. 43 pp.97-104.
Robert V, Awono-Ambene HP, Thioulouse J (1998)
Ecology of larval mosquitoes with special reference to Anopheles arabiensis (Diptera: Culcidae) in market-garden wells in urban Dakar Senegal, Journal of Medical Entomology, vol. 35 pp.948-955.
Champely S, Guinand B, Thioulouse J, Clermidy A (1997)
Functional data analysis of curve asymmetry with application to the color pattern of Hydropsyche contubernalis head capsule, Biometrics, vol. 53 pp.294-305.
Galtier N, Lobry JR (1997)
Relationships between genomic G+C content RNA secondary structures and optimal growth temperature in prokaryotes, Journal of Molecular Evolution, vol. 44 pp.632-636.
Lobry JR (1997)
Influence of genomic G+C content on average amino-acid composition of proteins from 59 bacterial species, Gene, vol. 205 pp.309-316.
Thioulouse J , Chessel D, Dolédec S, Olivier JM (1997)
ADE-4: a multivariate analysis and graphical display software, Statistics and Computing, vol. 7 pp.75-83.
Dufour A-B, Pagès M, Sempé M (1996)
L`analyse de la variance utilisée pour étudier l`évolution de l`indice de corpulence avec l`âge selon les différentes pathologies de croissance, Cahiers d`Anthropologie et Biométrie Humaine, vol. 14 pp.79-89.
Dufour A-B, Pontier J, Lefevre J , Beunen G (1996)
L`analyse canonique : une méthode ressource pour l`étude de l`évolution conjointe de deux ensembles d`indicateurs, Revue E.P.S., vol. 28 pp.141-151.
Guérin-Faublée V, Delignette-Muller M-L, Vigneulle M, Flandrois J-P (1996)
Application of a modified disc diffusion technique to antimicrobial susceptibility testing of Vibrio anguillarum and Aeromonas salmonicida clinical isolates, Veterinary Microbiology, vol. 51 pp.137-149.
Lobry JR (1996)
Asymmetric substitution patterns in the two DNA strands of bacteria, Molecular Biology and Evolution, vol. 13 pp.660-665.
Lobry JR (1996)
Origin of replication of Mycoplasma genitalium, Science, vol. 272 pp.745-746.
Lobry JR (1996)
A simple vectorial representation of DNA sequences for the detection of replication origins in bacteria, Biochimie, vol. 78 pp.323-326.
Pagès M, Dufour A-B, Mimouni N (1996)
Problèmes posés par les logiciels d`analyse discriminante. Discussion autour d`un exemple : Morphotypes de sportifs, Science et Motricité, vol. 29-30 pp.76-81.
Perrière G, Lobry JR, Thioulouse J (1996)
Correspondence discriminant analysis: a multivariate method for comparing classes of protein and nucleic acid sequences, Computer Applications in the Biosciences, vol. 12 pp.519-524.
Perrière G, Thioulouse J (1996)
On-line tools for sequence retrieval and multivariate statistics in molecular biology, Computer Applications in the Biosciences, vol. 12 pp.63-69.
Raymond M, Pontier D, Dufour A-B, Moller AP (1996)
Frequency-dependent maintenance of left handedness in humans, Proceedings of The Royal Society B-Biological Sciences, vol. 263 pp.1627-1633.
Thioulouse J (1996)
Towards Better Graphics for Multivariate Analysis: the Interactive Factor Map, Computational Statistics & Data Analysis, vol. 11 pp.11-21.
Thioulouse J, Chevenet F (1996)
NetMul a World-Wide Web user interface for multivariate analysis sofware, Computational Statistics & Data Analysis, vol. 21 pp.369-372.
Delignette-Muller M-L (1995)
Méthodes de prédiction des aptitudes de croissance des populations de micro-organismes .
Lobry JR (1995)
Properties of a general model of DNA evolution under no-strand-bias conditions, Journal of Molecular Evolution, vol. 40 pp.326-330.
Rosso L, Lobry JR, Bajard S, Flandrois J-P (1995)
Convenient Model To Describe the Combined Effects of Temperature and pH on Microbial Growth, Applied and Environmental Microbiology, vol. 61 pp.610-616.
Thioulouse J, Chessel D, Champely S (1995)
Multivariate analysis of spatial patterns: a unified approach to local and global structures, Environmental and Ecological Statistics, vol. 2 pp.1-14.
Thioulouse J, Doledec S, Chessel D, Olivier JM (1995)
DE software: multivariate analysis and graphical display of environmental data
in: , Software per l`ambiente, pp.57-62.
Thioulouse J, Lobry JR (1995)
Co-inertia analysis of amino-acid physico-chemical properties and protein composition with the ADE package, Bioinformatics, vol. 11 pp.321-329.
Cadet P, Thioulouse J, Albrecht A (1994)
Relationships between ferrisol properties and the structure of plant parasitic nematode communities on sugarcane in Martinique (French West Indies), Acta Oecologica, vol. 15 pp.767-780.
Chazaud P, Dufour A-B, Vignal B (1994)
Vers une typologie des campeurs. L`exemple de L`Ardèche, Cahier Espaces, vol. 36 pp.61-68.
Dufour A-B, Pagès M (1994)
Modèles de taille et de forme : Que choisir ?, Revue de Statistique Appliquée, vol. 42 pp.5-18.
Fritz H, Duncan P (1994)
On the carrying capacity for large ungulates of African savanna ecosystems, Proceedings of The Royal Society B-Biological Sciences, vol. 256 pp.77-82.
Lobry JR, Gautier C (1994)
Hydrophobicity expressivity and aromaticity are the major trends of amino-acid usage in 999 Escherichia coli chromosome-encoded genes, Nucleic Acids Research, vol. 22 pp.3174-3180.
Devillers J, Thioulouse J, Karcher W (1993)
Chemometrical evaluation of multispecies-multichemical data by means of graphical techniques combined with multivariate analyses, Ecotoxicology and environmental safety, vol. 26 pp.333-345.
Lefevre J, Dufour A-B, Beunen G, Claessens A (1993)
Relationships of motor performance of adult men to anthropometry : a multivariate analysis, American Journal of Human Biology, vol. 5 pp.351-359.
Rosso L, Lobry JR, Flandrois JP (1993)
An unexpected correlation between cardinal temperatures of microbial growth highlighted by a new model, Journal of Theoretical Biology, vol. 162 pp.447-463.
Thioulouse J, Royet JP, Ploye H, Houllier F (1993)
Evaluation of the Precision of Systematic Sampling : Nugget Effect and Covariogram Modelling, Journal of Microscopy, vol. 172 pp.249-256.
Lobry JR, Carret G, Flandrois J-P (1992)
Maintenance requirements of Escherichia coli ATCC 25922 in the presence of sub-inhibitory concentrations of various antibiotics, Journal of Antimicrobial Chemotherapy, vol. 29 pp.121-127.
Lobry JR, Flandrois J-P, Carret G, Pavé A (1992)
Monod`s bacterial growth model revisited, Bulletin of Mathematical Biology, vol. 54(1) pp.117-122.
Thioulouse J, Chessel D (1992)
A method for reciprocal scaling of species tolerance and sample diversity, Ecology, vol. 73 pp.670-680.
Carret G, Flandrois J-P, Lobry JR (1991)
Biphasic kinetics of bacterial killing by quinolones, Journal of Antimicrobial Chemotherapy, vol. 27 pp.319-327.
Chessel D, Thioulouse J (1991)
Auto-Modelisation en Analyse des Donnees
in: Modelisation confluent des Sciences, Editions du CNRS, pp.71-86.
Devillers J, Thioulouse J, Domine D, Chastrette M, Karcher W (1991)
Multivariate Analysis of the Input and Output Data in the Fugacity Model Level I
in: Applied Multivariate Analysis in SAR and Environmental Studies, Kluwer Academic Publishers, pp.281-345.
Lobry JR (1991)
Re-Evalution du modèle de croissance de Monod. Effet des antibiotiques sur l`énergie de maintenance. .
Lobry JR, Flandrois J-P (1991)
Comparison of estimates of Monod`s growth model from the same data set, Binary, vol. 3 pp.20-23.
Lobry JR, Rosso L, Flandrois J-P (1991)
A FORTRAN subroutine for the determination of parameter confidence limits in non-linear Models, Binary, vol. 3 pp.86-93.
Thioulouse J, Devillers J, Chessel D, Auda Y (1991)
Graphical Techniques for Multidimensional Data Analysis
in: Applied Multivariate Analysis in SAR and Environmental Studies, Kluwer Academic Publishers, pp.153-205.
Thioulouse J (1990)
MacMul and GraphMu :two Macintosh programs for the display and analysis of multivariate data, Computers and Geosciences UK, vol. 16 pp.1235-1240.
Cadet P, Thioulouse J (1989)
Traitements nematicides et peuplement de nematodes parasites de la canne a sucre au Burkina Faso. I : Repousses, Revue de Nématologie, vol. 12 pp.35-44.
Thioulouse J (1989)
Statistical analysis and graphical display of multivariate data on the Macintosh, Computer Applications in the Biosciences, vol. 5 pp.287-292.
Thioulouse J (1987)
Space-Time Structure in a Winter Rape Pest Population Psylliodes chrysocephala (Col. chrysomelidae): methodological proposals and biological interpretations, Journal of Applied Ecology, vol. 24 pp.435-450.
Thioulouse J, Chessel D (1987)
Les analyses multitableaux en ecologie factorielle. I : de la typologie d`etat a la typologie de fonctionnement par l`analyse triadique, Acta Oecologica Oecologia Generalis, vol. 8 pp.463-480.
Debouzie D, Thioulouse J (1986)
Statistics to find spatial and temporal structures in populations
in: Pest control: operations and system analysis in fruit fly managment NATO ASI Series, Springer Verlag, pp.263-282.
Thioulouse J, Houllier F, Onillon JC (1985)
Variables regionalisees et denombrement d`Insectes : cas unidimensionnel, Comptes Rendus de l`Académie des Sciences - Séries III - Sciences de la Vie, vol. 301 pp.423-428.
Thioulouse J, Mathy B, Ploye H (1985)
Estimation d`un Volume a partir de Coupes Seriees : Sous-Echantillonnage Covariogramme Transitif et Calcul de Precision, Mikroskopie (Wien), vol. 42 pp.215-224.
Thioulouse J, Debouzie D, Ballanger Y (1984)
Structures spatiales et temporelles des populations d`un ravageur du Colza (Psylliodes chrysocephala L. (Col. Chrysomelidae)) dans plusieurs parcelles de culture, Acta Oecologica Oecologia Applicata, vol. 5 pp.335-353.