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  • PhD subject: "Adaptation genetics of the Asian Tiger Mosquito Aedes albopictus to recently colonized environments"

    Current projects:
    - adaptation genetics of the Asian tiger mosquito Aedes albopictus (advisor: Matthieu Boulesteix; collab. P. Mavingui, C. Valiente-Moro, G. Minard (UMR 5557 Ecologie Microbienne, Lyon)

    - annotation and analysis of the repeated DNA in the rice weevil Sitophilus oryzae (advisors: Abdelaziz Heddi, Cristina Vieira, Matthieu Boulesteix)

    - devlopment of the dnaPipeTE pipeline, for assembly, annotation and analysis of transposable elements sequences in raw NGS dataset (collab. Laurent Modolo)

    See my CV

    credits: Susan Ellis, ECDC/VBORNET, Hohenlohe 2011

    • +Detailed project
  • dnaPipeTE

    During my PhD I developped a bio-informatic pipeline to analyse transposable elements in none assembled genomes.

    dnaPipeTE allow to find, annotate and quantify repeateted DNA in low coverage short read samples.

    More information and download are available on the dnaPipeTE website.

    Collaborator : Laurent Modolo

+Publications