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Vincent Miele
Ingénieur de recherche - CNRS
courriel :
tél : +(33) 04 72 44 85 44
"Biométrie et Biologie Évolutive"
UCB Lyon 1  - Bât. Grégor Mendel
43 bd du 11 novembre 1918
69622 VILLEURBANNE cedex
Bâtiment : Mendel 1er étage Bureau : 141

Multiplex ecological network

« We declare, with more than 11,000 scientist signatories from around the world, clearly and unequivocally that planet Earth is facing a climate emergency. »

  • Overview

    I am working in CNRS @ Biometry and Evolutionary Biology Lab. With a background in mathematics and computer science, I am involved in projects in ecology, on two main axes :

    - ecological networks : analysing original datasets, proposing new methodological developments and helping non specialists (see this "quick tips" paper) ;

    - image, ecology & deep learning : as a leader of the imaginecology initiative (see imaginecology website), developping computer vision pipelines and sharing knowledge with other ecologists.

    Multiplex ecological network Giraffe detection with YOLO Parallel computing with R

  • Forthcoming & recent papers


    Vincent Miele, Gaspard Dussert, Bruno Spataro, Simon Chamaillé-Jammes, Dominique Allainé & Christophe Bonenfant, Revisiting giraffe photo-identification using deep learning and network analysis. bioRxiv (2020)

    Vincent Miele, Gaspard Dussert, Thomas Cucchi & Sabrina Renaud, Deep learning for species identification of modern and fossil rodent molars. bioRxiv (2020)


    Vincent Miele, Rodrigo Ramos-Jiliberto & Diego P. Vazquez, Core–periphery dynamics in a plant–pollinator network. Journal of Animal Ecology (2020)

    Ana M Martin Gonzalez, Diego Pedro Vazquez, Rodrigo Ramos-Jiliberto, Sang Hoon Lee, Vincent Miele, Core-periphery structure in mutualistic networks : an epitaph for nestedness ? bioRxiv (2020)

    Vincent Miele, Christian Guill, Rodrigo Ramos-Jiliberto & Sonia Kéfi, Non-trophic interactions strengthen the diversity—functioning relationship in an ecological bioenergetic network model. PLoS Comp. Biology (2019).

    Marc Ohlmann, Vincent Miele, Stéphane Dray, Loïc Chalmandrier, Louise O’Connor & Wilfried Thuiller, Diversity indices for ecological networks : a unifying framework using Hill numbers Ecology Letters (2019)

    Sonia Kéfi, Vincent Miele, Evie A. Wieters, Sergio A. Navarrete & Eric L. Berlow, How structured is the entangled bank ? The surprisingly simple organization of multiplex ecological networks leads to increased persistence and resilience. PLoS Biology (2016)


    Vincent Miele, Catherine Matias, Stéphane Robin & Stéphane Dray, Nine Quick Tips for Analyzing Network Data. PLoS Comp. Biology (2019)

    Catherine Matias & Vincent Miele, Statistical clustering of temporal networks through dynamic a stochastic block model. Journal of the Royal Statistical Society : Series B (2016) Arxiv


    Daphné Reiss, Gladys Mialdea, Vincent Miele, Damien de Vienne, Jean Peccoud, Clément Gilbert, Laurent Duret, Sylvain Charlat, Global survey of mobile DNA horizontal transfer in arthropods reveals Lepidoptera as a prime hotspot. PLoS Genetics (2019)

    Samuel Venner, Vincent Miele, Christophe Terzian, Christian Biémont, Vincent Daubin, Cédric Feschotte & Dominique Pontier, Ecological networks to unravel the routes to horizontal transposon transfers. PLoS Biology (2017)


    Vincent Miele et Violaine Louvet, Calcul parallèle avec R. Collection PratiqueR, EDP Sciences (+ d’infos ici)

  • +Curriculum Vitae
  • +Students/collaborators
  • +Software