I am generally interested in developing statistical and machine learning methods to solve problems in molecular biology.

In particular, I have ongoing projects on :

  • GWAS for bacterial genomes and metagenomes, with collaborators at Pendulum and UC Berkeley.
  • Improving the inference of phylogenetic trees, with local collaborators at LBBE.
  • Predicting phenotypes from sequences using sparse learning and convolutional networks, with collaborators at Inria.

Publications

Display of 1 to 30 publications on 38 in total