Publications
Affichage des publications 91 à 120 sur 209 au total
Initial metabolic reconstruction of Klebsiella pneumoniae Kp13, a multidrug resistant pathogen involved in nosocomial outbreaks in Brazil
X-meeting .
Acte de congrès
voir la publicationUsing the “CycADS” annotation management system to develop a BioCyc metabolic network database for sequenced arthropods genomes: first steps towards “ArthropodsCyc”
Rencontres bioinformaticiens et statisticiens de l’INRA . : 1 p.
Poster
voir la publicationAbsence of a core metabolic network common to symbiotic bacteria
6. Meeting GDRE-RA Comparative genomics . : 33 diapositives
Acte de congrès
voir la publicationCycADS: an annotation database system to ease the development and update of BioCyc databases.
Database - The journal of Biological Databases and Curation . 2011 : bar008
Article dans une revue
voir la publicationBacterial syntenies: an exact approach with gene quorum.
BMC Bioinformatics . 12 : 193
Article dans une revue
voir la publicationA tale of genome, annotations, metabolism and phylogenomics: the pea aphid genome resources
10. Cold Spring Harbor Laboratory / Wellcome Trust conference on Genome Informatics . : 1 p.
Poster
voir la publicationMetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks
JOBIM 2010 . : 1 p.
Poster
voir la publicationMod/Resc Parsimony Inference
Combinatorial Pattern Matching . 6129 : 202--213
Acte de congrès
voir la publicationA note on the complexity of finding and enumerating elementary modes.
BioSystems . 99 ( 3 ) : 210-4
Article dans une revue
voir la publicationEnumerating Chemical Organisations in Consistent Metabolic Networks: Complexity and Algorithms
Algorithms in Bioinformatics . 6293 : 226-237
Acte de congrès
voir la publicationUsing the “CycADS” annotation management system to develop a BioCyc metabolic network database for sequenced arthropods genomes: first steps towards “ArthropodsCyc”
4. Annual Arthropod Genomics Symposium on “Arthropod Genomics: New Approaches and Outcomes” . : 45 p.
Poster
voir la publicationRepetition-free longest common subsequence
Discrete Applied Mathematics . 158 ( 12 ) : 1315-1324
Article dans une revue
voir la publicationCombination of measures distinguishes pre-miRNAs from other stem-loops in the genome of the newly sequenced Anopheles darlingi
BMC Genomics . 11 ( 1 ) : 529
Article dans une revue
voir la publicationIdentifying SNPs without a reference genome by comparing raw reads
String Processing and Information Retrieval . 6393 : 147-158
Acte de congrès
voir la publicationCassis: detection of genomic rearrangement breakpoints.
Bioinformatics . 26 ( 15 ) : 1897-8
Article dans une revue
voir la publicationGenome Sequence of the Pea Aphid Acyrthosiphon pisum
PLoS Biology . 8 ( 2 ) : e1000313
Article dans une revue
voir la publicationMetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks.
Nucleic Acids Research . 38 ( Web Server issue ) : W132-7
DOI: 10.1093/nar/gkq312
Article dans une revue
voir la publicationGraph-based analysis of the metabolic exchanges between two co-resident intracellular symbionts, Baumannia cicadellinicola and Sulcia muelleri, with their insect host, Homalodisca coagulata.
PLoS Computational Biology . 6 ( 9 ) : epub ahead of print
Article dans une revue
voir la publicationThe Acyrthosiphon pisum Cyc database (AcypiCyc) created using a novel BioCyc Annotation Database System (CycADS): a useful tool to explore and study the pea aphid metabolism
5th Meeting of the International Aphid Genomics Consortium "Pea Aphid Genome Annotation Workshop 2, Barcelona, Espagne, juin 2009 .
Acte de congrès
voir la publicationFootprints of Inversions at Present and Past Pseudoautosomal Boundaries in Human Sex Chromosomes
Genome Biology and Evolution . 1(1) : 56-66
Article dans une revue
voir la publicationIdentification of expressed transposable element insertions in the sequenced genome of Drosophila melanogaster
Gene . 439 : 55-62
Article dans une revue
voir la publicationAnalysis of fine-scale mammalian evolutionary breakpoints provides new insight into their relation to genome organisation
BMC Genomics . 10 ( 1 ) : 335
Article dans une revue
voir la publicationSystemic analysis of the symbiotic function of Buchnera aphidicola, the primary endosymbiont of the pea aphid Acyrthosiphon pisum.
Comptes Rendus Biologies . 332 ( 11 ) : 1034-49
Article dans une revue
voir la publicationMultiple alignment of biological networks: A flexible approach
Combinatorial Pattern Matching (CPM) . 5577 : 263-273
Acte de congrès
voir la publicationAssessing the exceptionality of coloured motifs in networks
EURASIP Journal on Bioinformatics and Systems Biology . 2009 : 9 pages on line
DOI: 10.1155/2009/616234
Article dans une revue
voir la publicationCurrent tools for the identification of miRNA genes and their targets
Nucleic Acids Research . 2009 : 2419-2433
Article dans une revue
voir la publicationLossless filter for multiple repeats with bounded edit distance
Algorithms for Molecular Biology . 4 ( 1 ) : 3
Article dans une revue
voir la publicationAn asymmetric approach to preserve common intervals while sorting by reversals
Algorithms for Molecular Biology . 4 ( 1 ) : 16
Article dans une revue
voir la publicationAcypiCyc (Acyrthosiphon pisum Cyc database) and CycADS (Cyc Annotation Database System): moving from genome sequence annotation to metabolic network analyses
8th International Symposium on Aphids (8 ISA 2009) . : 1-1
Acte de congrès
voir la publicationAcypiCyc (Acyrthosiphon pisumCyc database) and CycADS (CycAnnotation Database System) : moving from genome sequence annotation to metabolic network analyses
8. International Symposium on Aphids (8 ISA 2009) .
Acte de congrès
voir la publication