Evolutionary Ecology

Quantitative and Evolutionary Ecology of Communities Group

Dray Stéphane

Directeur de recherche

CNRS

Address: 69622 VILLEURBANNE cedex
69622 VILLEURBANNE cedex

Tel: 33 04 72 43 27 57

Email

I am a statistical ecologist (aka biometrician, biostatistician, quantitative ecologist, numerical ecologist, etc.). My work consists in developing novel statistical methods for analyzing biological data with a special emphasis on multivariate analysis and spatial statistics. I am mainly interested in understanding the role of multiple factors (e.g., species traits, environment) that influence the (spatial) structure of ecological communities and control beta diversity.

More details at https://sdray.github.io/

Publications

Display of 1 to 30 publications on 91 in total

Quantifying the overall effect of biotic interactions on species distributions along environmental gradients

Marc Ohlmann, Giovanni Poggiato, Stéphane Dray, Wilfried Thuiller, Catherine Matias, Vincent Miele

Preprint

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The global spectrum of plant form and function: enhanced species-level trait dataset

Sandra Díaz, Jens Kattge, Johannes H C Cornelissen, Ian J Wright, Sandra Lavorel, Stéphane Dray...

Scientific Data . 9 ( 1 ) : 1-18

DOI: 10.1038/s41597-022-01774-9

Journal article

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Mycobacterium tuberculosis genetic features associated with pulmonary tuberculosis severity

Charlotte Genestet, Guislaine Refrégier, Elisabeth Hodille, Rima Zein-Eddine, Adrien Le Meur, Fiona Hak...

International Journal of Infectious Diseases . 125 : 74-83

DOI: 10.1016/j.ijid.2022.10.026

Journal article

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Editorial: Advances in Statistical Ecology: New Methods and Software

Gilles Guillot, Ali Arab, Janine Bärbel Illian, Stéphane Dray

Frontiers in Ecology and Evolution . 9

DOI: 10.3389/fevo.2021.828919

Journal article

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An appraisal of graph embeddings for comparing trophic network architectures

Christophe Botella, Stéphane Dray, Catherine Matias, Vincent Miele, Wilfried Thuiller

Methods in Ecology and Evolution . 13 ( 1 ) : 203-216

DOI: 10.1111/2041-210X.13738

Journal article

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Genetic and species‐level biodiversity patterns are linked by demography and ecological opportunity

Chloé Schmidt, Stéphane Dray, Colin J Garroway

Evolution - International Journal of Organic Evolution . 76

DOI: 10.1111/evo.14407

Journal article

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Determinants of genetic diversity and species richness of North American amphibians

Chloé Schmidt, Jason Munshi-South, Stéphane Dray, Colin J Garroway

Journal of Biogeography . 49 ( 11 ) : 2005-2015

DOI: 10.1101/2021.01.04.425301

Journal article

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Are human natal sex ratio differences across the world adaptive? A test of Fisher's principle

Mathieu Douhard, Stéphane Dray

Biology Letters . 17 ( 3 )

DOI: 10.1098/rsbl.2020.0620

Journal article

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Overcoming the Spurious Groups Problem in Between-Group PCA

Jean Thioulouse, Sabrina Renaud, Anne-Béatrice Dufour, Stéphane Dray

Evolutionary Biology .

DOI: 10.1007/s11692-021-09550-0

Journal article

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Long‐term high densities of African elephants clear the understorey and promote a new stable savanna woodland community

Nicolas Ferry, Stéphane Dray, Hervé Fritz, Audrey Ipavec, Benjamin Wigley, Tristan Charles‐dominique...

Journal of Vegetation Science . 32 ( 6 )

DOI: 10.1111/jvs.13101

Journal article

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Images, écologie et deep learning

Vincent Miele, Stéphane Dray, Olivier O. Gimenez

Regards sur la biodiversité .

Journal article

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Investigating microbial associations from sequencing survey data with co-correspondence analysis

Benjamin Alric, Cajo J.F. ter Braak, Yves Desdevises, Hugo Lebredonchel, Stéphane Dray

Molecular Ecology Resources . 20 ( 2 ) : 468-480

DOI: 10.1111/1755-0998.13126

Journal article

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Heterogeneity of water physico-chemical characteristics in artificially pumped waterholes: do African herbivores drink at the same locations and does it lead to interference competition?

Nicolas Ferry, Marion Cordonnier, Florence Hulot, Farisayi Dakwa, Lovelater Sebele, Stéphane Dray...

Journal of Arid Environments . 173 : 104014

DOI: 10.1016/j.jaridenv.2019.104014

Journal article

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Can an herbivore affect where a top predator kills its prey by modifying woody vegetation structure?

Nicolas Ferry, Moreangels Mbizah, Andrew Loveridge, David Macdonald, Stéphane Dray, Hervé Fritz...

Oecologia . 192 ( 3 ) : 779-789

DOI: 10.1007/s00442-020-04617-9

Journal article

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Phenotypic plasticity in the invasive pest Drosophila suzukii: activity rhythms and gene expression in response to temperature

Christophe Plantamp, Hélène Henri, Thibault Andrieux, Corinne Régis, Gladys Mialdea, Stéphane Dray...

Journal of Experimental Biology . 222 : jeb199398

DOI: 10.1242/jeb.199398

Journal article

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Flower phenology as a disruptor of the fruiting dynamics in temperate oak species

Éliane Schermer, Marie-Claude Bel-Venner, Jean‐michel Gaillard, Vincent Boulanger, Stéphane Dray, Iris Le Roncé...

New Phytologist . 225 ( 3 ) : 1181-1192

DOI: 10.1111/nph.16224

Journal article

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Testing the Mantel statistic with a spatially‐constrained permutation procedure

Julie Crabot, Sylvie Clappe, Stéphane Dray, T. Datry

Methods in Ecology and Evolution . 10 ( 4 ) : 532-540

DOI: 10.1111/2041-210X.13141

Journal article

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Diversity indices for ecological networks: a unifying framework using Hill numbers

Marc Ohlmann, Vincent Miele, Stéphane Dray, Loic Chalmandrier, Louise O’connor, Wilfried Thuiller

Ecology Letters . 22 ( 4 ) : 737-747

DOI: 10.1111/ele.13221

Journal article

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Spatial analyses of multi-trophic terrestrial vertebrate assemblages in Europe

Joao Braga, Laura Pollock, Ceres Barros, Núria Galiana Ibañez, José Montoya, Dominique Gravel...

Global Ecology and Biogeography . 28 ( 11 ) : 1636-1648

DOI: 10.1111/geb.12981

Journal article

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Nine Quick Tips for Analyzing Network Data

Vincent Miele, Stephane S. Robin, Catherine Matias, Stéphane Dray

PLoS Computational Biology . 15 ( 12 ) : e1007434

DOI: 10.1371/journal.pcbi.1007434

Journal article

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Disentangling good from bad practices in the selection of spatial or phylogenetic eigenvectors

David Bauman, Thomas Drouet, Stéphane Dray, Jason Vleminckx

Ecography . 41 ( 10 ) : 1638-1649

DOI: 10.1111/ecog.03380

Journal article

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Optimizing the choice of a spatial weighting matrix in eigenvector-based methods

David Bauman, Thomas Drouet, Marie-Josée Fortin, Stéphane Dray

Ecology . 99 ( 10 ) : 2159-2166

DOI: 10.1002/ecy.2469

Journal article

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Simple parametric tests for trait–environment association

Cajo J.F. ter Braak, Pedro Peres‐neto, Stéphane Dray

Journal of Vegetation Science . 29 ( 5 ) : 801-811

DOI: 10.1111/jvs.12666

Journal article

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Supervised Multiblock Analysis in R with the ade4 Package

Stéphanie Bougeard, Stéphane Dray

Journal of Statistical Software . 86 ( 1 )

DOI: 10.18637/jss.v086.i01

Journal article

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Multivariate Analysis of Ecological Data with ade4

Jean Thioulouse, Stéphane Dray, Anne-Béatrice Dufour, Aurélie Siberchicot, Thibaut Jombart, Sandrine Pavoine

DOI: 10.1007/978-1-4939-8850-1

Book

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Integrating spatial and phylogenetic information in the fourth‐corner analysis to test trait–environment relationships

Joao Braga, Cajo J.F. ter Braak, Wilfried Thuiller, Stéphane Dray

Ecology . 99 ( 12 ) : 2667-2674

Journal article

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Beyond neutrality: disentangling the effects of species sorting and spurious correlations in community analysis

Sylvie Clappe, Stéphane Dray, Pedro Peres-Neto

Ecology . 99 ( 8 ) : 1737-1747

DOI: 10.1002/ecy.2376

Journal article

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Algorithms and biplots for double constrained correspondence analysis

Cajo J.F. ter Braak, Petr Šmilauer, Stéphane Dray

Environmental and Ecological Statistics . 25 ( 2 ) : 171-197

DOI: 10.1007/s10651-017-0395-x

Journal article

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adegraphics: An S4 Lattice-Based Package for the Representation of Multivariate Data

Aurélie Siberchicot, A. Julien-Laferrière, Ab. Dufour, J. Thioulouse, S. Dray

The R Journal . 9 ( 2 ) : 198-212

DOI: 10.32614/RJ-2017-042

Journal article

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A critical issue in model-based inference for studying trait-based community assembly and a solution

Cajo J. F. ter Braak, P. Peres-Neto, Stéphane Dray

PeerJ . 5 : e2885

DOI: 10.7717/peerj.2885

Journal article

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