Evolutionary Ecology

Evolutionary Ecology of Communities Group Veterinary Public Health Group

Porphyre Thibaud

Titulaire de la Chaire de Santé Publique Vétérinaire

VetAgro-Sup

Address: 43 bd du 11 novembre 1918
69622 VILLEURBANNE cedex

Email

Publications

Display of 1 to 30 publications on 48 in total

The time of infection matters: seasonal interplay between host and pathogen drives epidemic dynamics

Rémi Fay, Marlène Gamelon, Eric Baubet, Thibaud Porphyre

Oikos .

DOI: 10.1111/oik.10750

Journal article

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Risk of further EHDV introduction in Europe

Amandine Bibard, Davide Martinetti, Albert Picado, Karine Chalvet-Monfray, Thibaud Porphyre

17. International Symposium on Veterinary Epidemiology and Economics .

Poster

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Cleaning practices of transport vehicles by commercial and non-commercial livestock markets users in Scotland

Rebecca Allen, Lisa Boden, Ian Hutchinson, Julie Stirling, Thibaud Porphyre

Research in Veterinary Science . : 105413

DOI: 10.1016/j.rvsc.2024.105413

Journal article

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Factors associated with the spatiotemporal distribution of dog rabies in Tunisia

Sana Kalthoum, Samia Mzoughi, Raja Gharbi, Monia Lachtar, Bassem Bel Haj Mohamed, Haikel Hajlaoui...

PLoS Neglected Tropical Diseases . 18 ( 8 ) : e0012296

DOI: 10.1371/journal.pntd.0012296

Journal article

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Quantitative risk assessment for the introduction of bluetongue virus into mainland Europe by long‐distance wind dispersal of Culicoides spp.: A case study from Sardinia

Amandine Bibard, Davide Martinetti, Aymeric Giraud, Albert Picado, Karine Chalvet-Monfray, Thibaud Porphyre

Risk Analysis .

DOI: 10.1111/risa.14345

Journal article

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Cleaning Practices of Transport Vehicles by Commercial and Non-Commercial Livestock Markets Users in Scotland

Rebecca Allen, Lisa Boden, Ian Hutchinson, Julie Stirling, Thibaud Porphyre

DOI: 10.2139/ssrn.4797905

Preprint

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Assessing the Risk of Windborne Dispersal of Culicoides Midges in Emerging Epizootic Hemorrhagic Disease Virus Outbreaks in France

Amandine Bibard, Davide Martinetti, Albert Picado, Karine Chalvet-Monfray, Thibaud Porphyre

Transboundary and emerging diseases . 2024 ( 1 ) : 5571195

DOI: 10.1155/2024/5571195

Journal article

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Interaction of Human Behavioral Factors Shapes the Transmission of Arboviruses by Aedes and Culex Mosquitoes

Aubane Renard, Fernanda Pérez Lombardini, Mitsuri Pacheco Zapata, Thibaud Porphyre, Ana Bento, Gerardo Suzán...

Pathogens . 12 ( 12 ) : 1421

DOI: 10.3390/pathogens12121421

Journal article

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Identifying target areas for risk-based surveillance and control of transboundary animal diseases: a seasonal analysis of slaughter and live-trade cattle movements in Uganda

Lina González-Gordon, Thibaud Porphyre, Adrian Muwonge, Noelina Nantima, Rose Ademun, Sylvester Ochwo...

Scientific Reports . 13 ( 1 ) : 18619

DOI: 10.1038/s41598-023-44518-4

Journal article

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Risk assessment of BTV-3 incursion from Sardinia by wind dispersal of Culicoides midges

Amandine Bibard, Davide Martinetti, Giraud Aymeric, Albert Picado de Puig, Karine Chalvet-Monfray, Thibaud Porphyre

Using Epidemiological Studies in Health Risk Assessments: Relevance, Reliability and Causality .

Poster

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« Un lavage, c’est un lavage » : des chauffeurs bovins face aux consignes sanitaires

Clémence Beslay, Mary Bouix, Henri Fauroux, Amandine Gautier, Francesco Luposella, Jean-Marie Pillon...

Les Mondes du travail . 2023 ( 29 ) : 147-163

Journal article

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Risk assessment of BTV incursion in Europe from Sardinia by Culicoides spp. wind dispersal

Amandine Bibard, Davide Martinetti, Giraud Aymeric, Albert Picado de Puig, Karine Chalvet-Monfray, Thibaud Porphyre

2023 SVEPM conference .

Poster

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Development and Evaluation of Two Approaches of Visual Sensitivity Analysis to Support Epidemiological Modeling

Erik Rydow, Rita Borgo, Hui Fang, Thomas Torsney-Weir, Ben Swallow, Thibaud Porphyre...

IEEE Transactions on Visualization and Computer Graphics . 29 ( 1 ) : 1255 - 1265

DOI: 10.1109/TVCG.2022.3209464

Journal article

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Developing digital contact tracing tailored to haulage in East Africa to support COVID-19 surveillance: a protocol

Adrian Muwonge, Christine Mbabazi Mpyangu, Allen Nsangi, Ibrahim Mugerwa, Barend Bronsvoort, Thibaud Porphyre...

BMJ Open . 12 ( 9 ) : e058457

DOI: 10.1136/bmjopen-2021-058457

Journal article

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A scoping review of foot‐and‐mouth disease risk, based on spatial and spatio‐temporal analysis of outbreaks in endemic settings

L González Gordon, Thibaud Porphyre, D Muhanguzi, A Muwonge, L Boden, Barend M. de C Bronsvoort

Transboundary and emerging diseases . 69 : 3198–3215

DOI: 10.1111/tbed.14769

Journal article

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FAIR data pipeline: provenance-driven data management for traceable scientific workflows

Sonia Natalie Mitchell, Andrew Lahiff, Nathan Cummings, Jonathan Hollocombe, Bram Boskamp, Ryan Field...

Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences . 380 ( 2233 ) : 20210300

DOI: 10.1098/rsta.2021.0300

Journal article

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Complex model calibration through emulation, a worked example for a stochastic epidemic model

Michael Dunne, Hossein Mohammadi, Peter Challenor, Rita Borgo, Thibaud Porphyre, Ian Vernon...

Epidemics . 39 : 100574

DOI: 10.1016/j.epidem.2022.100574

Journal article

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Exact Bayesian inference of epidemiological parameters from mortality data: application to African swine fever virus

David Ewing, Christopher Pooley, Kokouvi Gamado, Thibaud Porphyre, Glenn Marion

Journal of the Royal Society Interface . 19 ( 188 )

DOI: 10.1098/rsif.2022.0013

Journal article

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High Prevalence and Factors Associated With the Distribution of the Integron intI1 and intI2 Genes in Scottish Cattle Herds

Cristina Fernández Rivas, Thibaud Porphyre, Margo Chase-Topping, Charles Knapp, Helen Williamson, Olivier Barraud...

Frontiers in Veterinary Science . 8 : 755833

DOI: 10.3389/fvets.2021.755833

Journal article

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Prevalence and Epidemiology of Non-O157 Escherichia coli Serogroups O26, O103, O111, and O145 and Shiga Toxin Gene Carriage in Scottish Cattle, 2014–2015

Deborah Hoyle, Marianne Keith, Helen Williamson, Kareen Macleod, Heather Mathie, Ian Handel...

Applied and Environmental Microbiology . 87 ( 10 ) : e03142-20

DOI: 10.1128/AEM.03142-20

Journal article

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Using machine learning improves predictions of herd-level bovine tuberculosis breakdowns in Great Britain

K. Stański, S. Lycett, Thibaud Porphyre, Barend M. de C. Bronsvoort

Scientific Reports . 11 ( 1 ) : 2208

DOI: 10.1038/s41598-021-81716-4

Journal article

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Inferring livestock movement networks from archived data to support infectious disease control in developing countries

Adrian Muwonge, Paul Bessel, Thibaud Porphyre, Motta Paolo, Gustaf Rydevik, Guillaume Devailly...

DOI: 10.1101/2021.03.18.435930

Preprint

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Editorial: Risk-Based Evidence for Animal Health Policy

Lisa Boden, Harriet Auty, Amy Delgado, John Grewar, Amy Hagerman, Thibaud Porphyre...

Frontiers in Veterinary Science . 7

DOI: 10.3389/fvets.2020.00595

Journal article

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Post‐outbreak African horse sickness surveillance: A scenario tree evaluation in South Africa’s controlled area

John Duncan Grewar, Thibaud Porphyre, Evan Sergeant, Camilla Theresa Weyer, Peter Neil Thompson

Transboundary and emerging diseases . : tbed.13566

DOI: 10.1111/tbed.13566

Journal article

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Uptake of Diagnostic Tests by Livestock Farmers: A Stochastic Game Theory Approach

Sibylle Mohr, Rodney Beard, Alasdair Nisbet, Stewart Burgess, Richard Reeve, Matthew Denwood...

Frontiers in Veterinary Science . 7

DOI: 10.3389/fvets.2020.00036

Journal article

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Multilayer network analysis unravels haulage vehicles as a hidden threat to the British swine industry

Thibaud Porphyre, Barend Bronsvoort, George Gunn, Carla Correia-Gomes

Transboundary and emerging diseases . 67 ( 3 ) : 1231-1246

DOI: 10.1111/tbed.13459

Journal article

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Framework for Estimating Indirect Costs in Animal Health Using Time Series Analysis

Alyson Barratt, Karl Rich, Jude Eze, Thibaud Porphyre, George Gunn, Alistair Stott

Frontiers in Veterinary Science . 6

DOI: 10.3389/fvets.2019.00190

Journal article

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Characterizing Livestock Markets, Primary Diseases, and Key Management Practices Along the Livestock Supply Chain in Cameroon

Paolo Motta, Thibaud Porphyre, Ian Handel, Saidou Hamman, Victor Ngu Ngwa, Vincent Tanya...

Frontiers in Veterinary Science . 6

DOI: 10.3389/fvets.2019.00101

Journal article

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Endemic foot and mouth disease: pastoral in-herd disease dynamics in sub-Saharan Africa

I. Mclachlan, G. Marion, I. Mckendrick, Thibaud Porphyre, I. Handel, B. Bronsvoort

Scientific Reports . 9 ( 1 ) : 17349

DOI: 10.1038/s41598-019-53658-5

Journal article

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Assessing the potential of plains zebra to maintain African horse sickness in the Western Cape Province, South Africa

Thibaud Porphyre, John Grewar

PLoS ONE . 14 ( 10 ) : e0222366

DOI: 10.1371/journal.pone.0222366

Journal article

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