GECO Evolutionary and Computational Genomics

Bioinformatics, Phylogeny and Evolutionary Genomics Group

Lafay Bénédicte

Chargée de recherche

CNRS

Address: 43 bd du 11 novembre 1918
69622 VILLEURBANNE cedex

Tel: 33 04 72 44 85 60

Email

Publications

Display of 31 to 60 publications on 62 in total

Predictions for whole genome 2D display according to size and sequence composition

Bénédicte Lafay, Jean-François Mercier, Christine Kingsburry, Gary W. Slater

3rd SCOPE meeting on Microbial Environmental Genomics (MicroEnGenIII ) .

Conference paper

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Genetic diversity and phylogeographic clustering of SIVcpzPtt in wild chimpanzees in Cameroon.

Fran van Heuverswyn, Yingying Li, Elizabeth Bailes, Cecile Neel, Bénédicte Lafay, Brandon F Keele...

Virology . 368 ( 1 ) : 155-71

DOI: 10.1016/j.virol.2007.06.018

Journal article

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Molecular diversity of rhizobia nodulating the invasive legume Cytisus scoparius in Australia.

Bénédicte Lafay, Jeremy J. Burdon

Journal of Applied Microbiology . 100 ( 6 ) : 1228-38

DOI: 10.1111/j.1365-2672.2006.02902.x

Journal article

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Bradyrhizobia isolated from root nodules of Parasponia (Ulmaceae) do not constitute a separate coherent lineage.

Bénédicte Lafay, Erika Bullier, Jeremy J. Burdon

International Journal of Systematic and Evolutionary Microbiology . 56 ( Pt 5 ) : 1013-8

DOI: 10.1099/ijs.0.63897-0

Journal article

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Quantitative prediction for two-dimensional bacterial genomic displays

Jean-François Mercier, Bénédicte Lafay, Gary W. Slater

American Physical Society Meeting .

Conference paper

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Trypanosoma cruzi: sequence analysis of the variable region of kinetoplast minicircles

Jenny Telleria, Bénédicte Lafay, Myrna Virreira, Christian Barnabé, Michel Tibayrenc, Michal Svoboda

Experimental Parasitology . 114 ( 4 ) : 279-88

DOI: 10.1016/j.exppara.2006.04.005

Journal article

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Quantitative prediction for two-dimensional bacterial genomic displays

Jean-François Mercier, Gary W. Slater, Bénédicte Lafay

Joint 15th IUPAB and 5th EBSA International Biophysics Congress .

Conference paper

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Molecular analysis of the hypervariable regions in the minicircle of kinetoplastic genome in Trypanosoma cruzi, agent of Chagas'disease

Jenny Telleria, Bénédicte Lafay, Myrna Virreira, Christian Barnabé, Michel Tibayrenc, M. Svoboda

VII INTERNATIONAL MEETING ON MOLECULAR EPIDEMIOLOGY AND EVOLUTIONARY GENETICS OF INFECTIOUS DISEASES (MEEGID VII) .

Conference paper

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Brucella est un ochrobactrum à génome réduit

Corinne Teyssier, Bénédicte Lafay, Agnès Masnou, Estelle Jumas-Bilak, Hélène Marchandin

VI eme Congrès de la Société Française de Microbiologie .

Conference paper

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MgtC as a horizontally-acquired virulence factor of intracellular bacterial pathogens: evidence from molecular phylogeny and comparative genomics.

Anne-Béatrice Blanc-Potard, Bénédicte Lafay

Journal of Molecular Evolution . 57 ( 4 ) : 479-86

DOI: 10.1007/s00239-003-2496-4

Journal article

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Phylogenetic analysis of proteins homologous to the Salmonella MgtC virulence factor

Anne-Béatrice Blanc-Potard, Bénédicte Lafay

ASM Conference on Salmonella: Pathogenesis, Epidemiology, and Vaccine Development .

Conference paper

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Conflicting phylogeographic patterns in rRNA and nifD indicate regionally restricted gene transfer in Bradyrhizobium.

Matthew A. Parker, Benedicte Lafay, Jeremy J. Burdon, Peter van Berkum

Microbiology . 148 ( Pt 8 ) : 2557-65

Journal article

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Small-subunit rRNA genotyping of rhizobia nodulating Australian Acacia spp.

Bénédicte Lafay, Jeremy J. Burdon

Applied and Environmental Microbiology . 67 ( 1 ) : 396-402

DOI: 10.1128/AEM.67.1.396-402.2001

Journal article

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Molecular Systematics of sponges (Porifera)

Carole Borchiellini, Catherine Chombard, Bénédicte Lafay, Nicole Boury-Esnault

Hydrobiologia . 420 ( 1 ) : 15-27

DOI: 10.1023/A:1003996517083

Journal article

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Absence of translationally selected synonymous codon usage bias in Helicobacter pylori.

Bénédicte Lafay, John C. Atherton, Paul M. Sharp

Microbiology . 146 ( Pt 4) : 851-60

Journal article

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Synonymous codon usage variation among Giardia lamblia genes and isolates.

Bénédicte Lafay, Paul M. Sharp

Molecular Biology and Evolution . 16 ( 11 ) : 1484-95

Journal article

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Proteome composition and codon usage in spirochaetes: species-specific and DNA strand-specific mutational biases.

Bénédicte Lafay, Andrew T. Lloyd, Michael J. Mclean, Kevin M. Devine, Paul M. Sharp, Kenneth H. Wolfe

Nucleic Acids Research . 27 ( 7 ) : 1642-9

Journal article

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Molecular diversity of rhizobia occurring on native shrubby legumes in southeastern Australia

Bénédicte Lafay, Jeremy J. Burdon

Applied and Environmental Microbiology . 64 ( 10 ) : 3989-97

Journal article

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What is the state of the art in molecular systematics of marine Porifera ?

Nicole Boury-Esnault, Carole Borchiellini, Catherine Chombard, Bénédicte Lafay

Hydrobiologia .

Conference paper

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Sequence heterogeneities among 16S ribosomal RNA sequences, and their effect on phylogenetic analyses at the species level.

Valérie Cilia, Bénédicte Lafay, Richard Christen

Molecular Biology and Evolution . 13 ( 3 ) : 451-61

Journal article

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Roseobacter algicola sp. nov., a new marine bacterium isolated from the phycosphere of the toxin-producing dinoflagellate Prorocentrum lima.

Bénédicte Lafay, Raymond Ruimy, Catherine Rausch de Traubenberg, Violette Breittmayer, Michel J. Gauthier, Richard Christen

International Journal of Systematic Bacteriology . 45 ( 2 ) : 290-6

Journal article

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A combined morphological and molecular approach to the phylogeny of asteroids (Asteroidea: Echinodermata)

Bénédicte Lafay, Richard Christen, Andrew B. Smith

Systematic Biology . 44 ( 2 ) : 190-208

Journal article

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Small-subunit rRNA sequences and whole DNA relatedness concur for the reassignment of Pasteurella piscicida (Snieszko et al.) Janssen and Surgalla to the genus Photobacterium as Photobacterium damsela subsp. piscicida comb. nov.

Gilles Gauthier, Bénédicte Lafay, Raymond Ruimy, Violette Breittmayer, Jean-Louis Nicolas, Richard Christen

International Journal of Systematic Bacteriology . 45 ( 1 ) : 139-44

Journal article

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Ophiuroid phylogeny and higher taxonomy: morphological, molecular and palaeontological perspectives

Andrew B. Smith, Gordon L.J. Paterson, Bénédicte Lafay

Zoological Journal of the Linnean Society . 114 : 213-243

Journal article

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Phylogenetic analysis and assessment of the genera Vibrio, Photobacterium, Aeromonas, and Plesiomonas deduced from small-subunit rRNA sequences.

Raymond Ruimy, Violette Breittmayer, Philippe Elbaze, Bénédicte Lafay, Odile Boussemart, Michel Gautier...

International Journal of Systematic Bacteriology . 44 ( 3 ) : 416-26

Journal article

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Morphological and molecular phylogeny of ophiuroids

Andrew B. Smith, Bénédicte Lafay, Gordon L.J. Paterson

Eigth International Echinoderm Conference .

Conference paper

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An analysis of partial 28S ribosomal RNA sequence suggests early radiations within the phylum Porifera

Bénédicte Lafay, Nicole Boury-Esnault, Jean Vacelet, Richard Christen

4th International Porifera Congress "Sponges in Time and Space" .

Conference paper

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Comparative variation of morphological and molecular evolution through geologic time: 28S ribosomal RNA versus morphology in echinoids.

Andrew B. Smith, Bénédicte Lafay, Richard Christen

Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences (1934–1990) . 338 ( 1286 ) : 365-82

DOI: 10.1098/rstb.1992.0155

Journal article

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Phylogenetic analysis of the pathogenic anaerobe Clostridium perfringens using the 16S rRNA nucleotide sequence.

Bruno Canard, Thierry Garnier, Bénédicte Lafay, Richard Christen, Stewart T. Cole

International Journal of Systematic Bacteriology . 42 ( 2 ) : 312-4

DOI: 10.1099/00207713-42-2-312

Journal article

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Marinobacter hydrocarbonoclasticus gen. nov., sp. nov., a new, extremely halotolerant, hydrocarbon-degrading marine bacterium.

Michel J. Gauthier, Bénédicte Lafay, Richard Christen, Luis Fernandez, M. Acquaviva, Patricia Bonin...

International Journal of Systematic Bacteriology . 42 ( 4 ) : 568-76

Journal article

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