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Publications

Display of 2581 to 2610 publications on 6006 in total

Tinkering signaling pathways by gain and loss of protein isoforms: the case of the EDA pathway regulator EDARADD

Alexa Sadier, Elise Lambert, Pascale Chevret, Didier Décimo, Marie Sémon, Marie Tohmé...

BMC Evolutionary Biology . 15 : 129

DOI: 10.1186/s12862-015-0395-0

Journal article

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GC-Content evolution in bacterial genomes: The biased gene conversion hypothesis expands

Florent Lassalle, Séverine Périan, Thomas Bataillon, Xavier Nesme, L. Duret, Vincent Daubin

PLoS Genetics . 11 ( 2 ) : 1-20

DOI: 10.1371/journal.pgen.1004941

Journal article

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Quantification of GC-biased gene conversion in the human genome

Sylvain Glemin, Peter F. Arndt, Messer W. Philip, Petrov M. Dmitri, Nicolas Galtier, L. Duret

Genome Research . 25 ( 8 ) : 1215 - 1228

DOI: 10.1101/gr.185488.114

Journal article

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Optimization of multiplexed RADseq libraries using low-cost adaptors

Hélène Henri, Marie Cariou, Gabriel Terraz, Sonia Martinez, Adil El Filali, Marine Veyssière...

Genetica . 143 ( 2 ) : 139-143

DOI: 10.1007/s10709-015-9828-3

Journal article

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Incremental complexity of a bi-objective hypergraph transversal problem

Ricardo Andrade, Etienne E. Birmelé, Arnaud Mary, Thomas Picchetti, Marie-France Sagot

Fundamentals of Computation Theory (FCT2015) . 9210 : 202-213

DOI: 10.1007/978-3-319-22177-9_16

Conference paper

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EUCALYPT: efficient tree reconciliation enumerator

Beatrice Donati, Christian Baudet, Blerina Sinaimeri, Pierluigi Crescenzi, Marie-France Sagot

Algorithms for Molecular Biology . 10 ( 1 ) : 11

DOI: 10.1186/s13015-014-0031-3

Journal article

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Mirinho: An efficient and general plant and animal pre-miRNA predictor for genomic and deep sequencing data

Susan Higashi, Cyril Fournier, Christian Gautier, Christine Gaspin, Marie-France Sagot

BMC Bioinformatics . 16 ( 1 ) : 179

DOI: 10.1186/s12859-015-0594-0

Journal article

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Cophylogeny Reconstruction via an Approximate Bayesian Computation

Christian Baudet, Béatrice Donati, Blerina Sinaimeri, Pierluigi Crescenzi, Christian Gautier, Catherine Matias...

Systematic Biology . 64 ( 3 ) : 416-431

DOI: 10.1093/sysbio/syu129

Journal article

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An average study of hypergraphs and their minimal transversals

Julien David, Loïck Lhote, Arnaud Mary, François Rioult

Theoretical Computer Science . 596 : 124-141

DOI: 10.1016/j.tcs.2015.06.052

Journal article

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Analyse de 32 souches de Legionella pneumophila de sévérités variables afin d'identifier les déterminants de la pathogénicité

Amandine Campan-Fournier, Christine Oger, Christophe Ginevra, Vincent Navratil, Anne-Gaëlle Ranc, G. Perrière...

JOBIM 2015 - 16èmes Journées Ouvertes en BIologie, Informatique et Mathématiques .

Poster

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Evolutionary history of phosphatidylinositol- 3-kinases: ancestral origin in eukaryotes and complex duplication patterns

H. Philippon, Céline Brochier-Armanet, G. Perriere

BMC Evolutionary Biology . 15 : 226

DOI: 10.1186/s12862-015-0498-7

Journal article

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Molecular and functional evolution of the fungal diterpene synthase genes

Marc Fischer, Camille Rustenhloz, Véronique Leh-Louis, Guy Perrière

BMC Microbiology . 15 ( 1 ) : 221

DOI: 10.1186/s12866-015-0564-8

Journal article

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leBIBIQBPP: a set of databases and a webtool for automatic phylogenetic analysis of prokaryotic sequences

Jean-Pierre Flandrois, G. Perrière, Manolo Gouy

BMC Bioinformatics . 16 ( 1 ) : 251

DOI: 10.1186/s12859-015-0692-z

Journal article

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Sympatric divergence and clinal variation in multiple coloration traits of Ficedula flycatchers

T. Laaksonen, P. M. Sirkia, S. Calhim, J. E. Brommer, P. K. Leskinen, C. R. Primmer...

Journal of Evolutionary Biology . 28 ( 4 ) : 779-90

DOI: 10.1111/jeb.12604

Journal article

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Perception and knowledge of plant diversity among urban park users

Audrey Muratet, Patricia Pellegrini, Anne-Béatrice Dufour, Teddy Arrif, François Chiron

Landscape and Urban Planning . 137 : 95 - 106

DOI: 10.1016/j.landurbplan.2015.01.003

Journal article

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What a validation strategy means for the quantitation of cocaine and heroin?

Laurence Dujourdy, Céline Charvoz, Marion Dalmasso, Anne-Béatrice Dufour

Forensic Science International . 251 : 32-39

DOI: 10.1016/j.forsciint.2015.03.009

Journal article

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Neandertal Demise through Modeling: The Viewpoint of Population Dynamics

Anna Degioanni, Christophe Bonenfant, Sandrine Cabut, Silvana Condemi

5 TH ANNUAL MEETING OF THE European Society for the study of Human Evolution 4 . 4 : 73

Conference paper

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Le pestivirus et les isards, une interaction durable

Emmanuelle Gilot-Fromont, Kevin Foulché, Yvette Game, Pauline Ezanno, Ignasi Marco, Philippe Gibert

Faune Sauvage . 307 ( 307 ) : 17-22

Journal article

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Staphylococcus aureus infective endocarditis versus bacteremia strains: Subtle genetic differences at stake

Coralie Bouchiat, Karen Moreau, Sébastien Devillard, Jean-Philippe Rasigade, Amandine Mosnier, Thomas Geissmann...

Infection, Genetics and Evolution . 36 : 524 - 530

DOI: 10.1016/j.meegid.2015.08.029

Journal article

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“False heat,” big testes, and the onset of natal dispersal in European pine Martens (Martes martes)

Jeremy Larroque, Sandrine Ruette, Jean-Michel Vandel, Sébastien Devillard

European Journal of Wildlife Research . 61 ( 2 ) : 333-337

DOI: 10.1007/s10344-014-0889-x

Journal article

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Divergent landscape effects on genetic differentiation in two populations of the European pine marten (Martes martes)

J. Larroque, S. Ruette, Jm. Vandel, Sébastien Devillard

Landscape Ecology . 31 : 517-531

Journal article

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Where to sleep in a rural landscape? A comparative study of resting sites pattern in two syntopic Martes species

Jeremy Larroque, Sandrine Ruette, Jean-Michel Vandel, Sébastien Devillard

Ecography . 38 ( 11 ) : 1129-1140

DOI: 10.1111/ecog.01133

Journal article

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Evolution of Helicobacter: Acquisition by Gastric Species of Two Histidine-Rich Proteins Essential for Colonization

Daniel Vinella, Frédéric Fischer, Egor Vorontsov, Julien Gallaud, Christian Malosse, Valérie Michel...

PLoS Pathogens . 11 ( 12 ) : e1005312

DOI: 10.1371/journal.ppat.1005312

Journal article

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Exploration of Frankia genomes to identify genetic determinants involved in sporogenesis: Towards promising tracks to understand in plant sporuration

Lorine Bethencourt, N. Taib, J. Briolay, P. Fournier, M.P. Fernandez, Céline Brochier-Armanet...

18th International Meeting on Frankia and Actinorhizal plants .

Poster

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Evolution and Design Governing Signal Precision and Amplification in a Bacterial Chemosensory Pathway

Mathilde Guzzo, Rym Agrebi, Leon Espinosa, Gregory Baronian, Virginie Molle, Emilia M. F. Mauriello...

PLoS Genetics . 11 ( 8 ) : e1005460

DOI: 10.1371/journal.pgen.1005460

Journal article

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Taxonomy and Phylogeny of Prokaryotes

Pierre Caumette, Céline Brochier-Armanet, Philippe Normand

Environmental Microbiology: Fundamentals and Applications . 978-94-017-9118-2 : 145-190

DOI: 10.1007/978-94-017-9118-2_6

Book chapter

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Draft genome sequence of Mesotoga strain PhosAC3, a mesophilic member of the bacterial order Thermotogales, isolated from a digestor treating phosphogypsum in Tunisia

Wajdi Ben Hania, Khaled Fadhlaoui, Céline Brochier-Armanet, Cecile Persillon, Anne Postec, Moktar Hamdi...

Standards in Genomic Sciences . 10

DOI: 10.1186/1944-3277-10-12

Journal article

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Genome-wide survey of two-component signal transduction systems in the plant growth-promoting bacterium Azospirillum

Stéphanie Borland, Anne Oudart, Claire Prigent-Combaret, Céline Brochier-Armanet, Florence Wisniewski-Dyé

BMC Genomics . 16 : 833

DOI: 10.1186/s12864-015-1962-x

Journal article

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Extending the conserved phylogenetic core of \textitarchaea disentangles the evolution of the third domain of life

C. Petitjean, P. Deschamps, P. Lopez-Garcia, D. Moreira, Céline Brochier-Armanet

Molecular Biology and Evolution . 32 : 1242-54

Journal article

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