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Showing results 5261 to 5280 on 8430 in total
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BrumiR: A toolkit for de novo discovery of microRNAs from sRNA-seq data
Carol Moraga, Evelyn Sanchez, Mariana Galvão Ferrarini, Rodrigo A Gutierrez, Elena A Vidal, Marie-France Sagot
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Totoro: Identifying Active Reactions During the Transient State for Metabolic Perturbations
Mariana Galvão Ferrarini, Irene Ziska, Ricardo Andrade, Alice Julien-Laferrière, Louis Duchemin, Roberto Marcondes César, Arnaud Mary, Susana Vinga, Marie-France Sagot
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A General Framework for Enumerating Equivalence Classes of Solutions
Yishu Wang, Arnaud Mary, Marie-France Sagot, Blerina Sinaimeri
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Making Sense of a Cophylogeny Output: Efficient Listing of Representative Reconciliations
Yishu Wang, Arnaud Mary, Marie-France Sagot, Blerina Sinaimeri
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Dichloroacetate and Pyruvate Metabolism: Pyruvate Dehydrogenase Kinases as Targets Worth Investigating for Effective Therapy of Toxoplasmosis
Mariana Galvão Ferrarini, Lindice Mitie Nisimura, Richard Marcel Bruno Moreira Girard, Mayke Bezerra Alencar, Mariana Sayuri Ishikawa Fragoso, Carlla Assis Araújo-Silva, Alan de Almeida Veiga, Ana Paula Ressetti Abud, Sheila Cristina Nardelli, Rossiane C Vommaro, Ariel Mariano Silber, Marie-France Sagot, Andréa Rodrigues Ávila
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A family of tree-based generators for bubbles in directed graphs
Vicente Acuña, Leandro Ishi Soares de Lima, Giuseppe F Italiano, Luca Pepè Sciarria, Marie-France Sagot, Blerina Sinaimeri
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A comprehensive evaluation of binning methods to recover human gut microbial species from a non-redundant reference gene catalog
Marianne Borderes, Cyrielle Gasc, Emmanuel Prestat, Mariana Galvão Ferrarini, Susana Vinga, Lilia Boucinha, Marie-France Sagot
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Efficient hybrid de novo assembly of human genomes with WENGAN
Alex Di Genova, Elena Buena-Atienza, Stephan Ossowski, Marie-France Sagot
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MOMO - multi-objective metabolic mixed integer optimization: application to yeast strain engineering
Ricardo Andrade, Mahdi Doostmohammadi, João Santos, Marie-France Sagot, Nuno P Mira, Susana Vinga
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Capybara: equivalence ClAss enumeration of coPhylogenY event-BAsed ReconciliAtions
Yishu Wang, Arnaud Mary, Marie-France Sagot, Blerina Sinaimeri
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A Family of Tree-Based Generators for Bubbles in Directed Graphs
Vicente Acuña, Leandro Ishi Soares de Lima, Giuseppe F Italiano, Luca Pepè Sciarria, Marie-France Sagot, Blerina Sinaimeri
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MOOMIN – Mathematical explOration of ’Omics data on a MetabolIc Network
Taneli Pusa, Mariana G. Ferrarini, Ricardo Andrade, Arnaud Mary, Alberto Marchetti-Spaccamela, Leen Stougie, Marie-France Sagot
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Algorithms for the quantitative Lock/Key model of cytoplasmic incompatibility
Tiziana Calamoneri, Mattia Gastaldello, Arnaud Mary, Marie-France Sagot, Blerina Sinaimeri
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Mycoplasma hyopneumoniae J elicits an antioxidant response and decreases the expression of ciliary genes in infected swine epithelial cells
Scheila Gabriele Mucha, Mariana G. Ferrarini, Carol Moraga, Alex Di Genova, Laurent Guyon, Florence Tardy, Sophie Rome, Marie-France Sagot, Arnaldo Zaha
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A Distance-based block searching algorithm
M-F. Sagot, Alain Viari, H. Soldano
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Metabolic Games
Taneli Pusa, Martin Wannagat, Marie-France Sagot
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On Bubble Generators in Directed Graphs
Vicente Acuña, Roberto Grossi, Giuseppe F. Italiano, Leandro Lima, Romeo Rizzi, Gustavo Sacomoto, Marie-France Sagot, Blerina Sinaimeri
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Exploring the Robustness of the Parsimonious Reconciliation Method in Host-Symbiont Cophylogeny
Laura Urbini, Blerina Sinaimeri, Catherine Matias, Marie-France Sagot
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Exploring and Visualising Spaces of Tree Reconciliations
Katharina Huber, Vincent Moulton, Marie-France Sagot, Blerina Sinaimeri
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Pierce's Disease of Grapevines: A Review of Control Strategies and an Outline of an Epidemiological Model
Ifigeneia Kyrkou, Taneli Pusa, Lea Ellegaard-Jensen, Marie-France Sagot, Lars Hestbjerg Hansen