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Showing results 5381 to 5400 on 8514 in total
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BRASERO: A resource for benchmarking RNA secondary structure comparison algorithms
Julien Allali, Cédric Saule, Cedric Chauve, Yves d'Aubenton-Carafa, Alain Denise, Christine Drevet, Pascal Ferraro, Daniel Gautheret, Claire Herrbach, Fabrice Leclerc, Antoine de Monte, Aida Ouangraoua, Marie-France Sagot, Michel Termier, Claude Thermes, Hélène Touzet
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KISSPLICE: de-novo calling alternative splicing events from RNA-seq data
Gustavo Sacomoto, Janice Kielbassa, Rayan Chikhi, Raluca Uricaru, Pavlos Antoniou, Marie-France Sagot, Pierre Peterlongo, Vincent Lacroix
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Absence of a core metabolic network common to symbiotic bacteria
Cecilia Coimbra Klein, Ludovic Cottret, Hubert Charles, Christian Gautier, Ana Tereza Ribeiro de Vasconcelos, Vincent Lacroix, Marie-France Sagot
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Finding Long and Multiple Repeats with Edit Distance
Maria Federico, Pierre Peterlongo, Nadia Pisanti, Marie-France Sagot
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“ArthropodaCyc”: a BioCyc database powered by CycADS to study and compare the metabolism of arthropods
Patrice Baa-Puyoulet, Augusto Vellozo, Jaime Huerta-Cepas, Gérard Febvay, Toni Gabaldon, Marie-France Sagot, Hubert Charles, Stefano Colella
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ArthropodaCyc: a BioCyc database powered by CycADS to study and compare the metabolism of arthropods
Patrice Baa-Puyoulet, Augusto F Vellozo, Jaime Huerta-Cepas, Gérard Febvay, T. Gabaldon, Marie-France Sagot, Hubert Charles, Stefano Colella
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Using the “CycADS” annotation management system to develop a BioCyc metabolic network database for sequenced arthropods genomes: first steps towards “ArthropodsCyc”
Patrice Baa-Puyoulet, Augusto Vellozo, Jaime Huerta-Cepas, Gérard Febvay, Toni Gabaldon, Marie-France Sagot, Hubert Charles, Stefano Colella
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Bacterial syntenies: an exact approach with gene quorum.
Yves-Pol Deniélou, Marie-France Sagot, Frédéric Boyer, Alain Viari
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Initial metabolic reconstruction of Klebsiella pneumoniae Kp13, a multidrug resistant pathogen involved in nosocomial outbreaks in Brazil
P. Ivan, Cecilia C. Klein, Ludovic Cottret, Ana T Vasconcelos, Ac Gales, Marie-France Sagot, M. Nicolas
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Close 3D proximity of evolutionary breakpoints argues for the notion of spatial synteny
Amélie Véron, Claire Lemaitre, Christian Gautier, Vincent Lacroix, Marie-France Sagot
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CycADS: an annotation database system to ease the development and update of BioCyc databases.
Augusto F Vellozo, Amélie S Véron, Patrice Baa-Puyoulet, Jaime Huerta-Cepas, Ludovic Cottret, Gérard Febvay, Federica Calevro, Yvan Rahbé, Angela E Douglas, Toni Gabaldón, Marie-France Sagot, Hubert Charles, Stefano Colella
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Metabolic network comparison of bacteria in the context of symbiosis
Cecilia C. Klein, Ludovic Cottret, Hubert Charles, Christian Gautier, Ana T Vasconcelos, Vincent Lacroix, Marie-France Sagot
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Identifying SNPs without a reference genome by comparing raw reads
Pierre Peterlongo, Nicolas Schnel, Nadia Pisanti, Marie-France Sagot, Vincent Lacroix
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A tale of genome, annotations, metabolism and phylogenomics: the pea aphid genome resources
Fabrice Legeai, Stefano Colella, Jaime Huerta-Cepas, Jean-Pierre Gauthier, Augusto Vellozo, Patrice Baa-Puyoulet, Marie-France Sagot, Toni Gabaldon, Olivier Collin, Hubert Charles, Denis Tagu
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MetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks
Ludovic Cottret, David Wildridge, Florence Vinson, Michael P. Barrett, Marie-France Sagot, Hubert Charles, Fabien Jourdan
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Cassis: detection of genomic rearrangement breakpoints.
Christian Baudet, Claire Lemaitre, Zanoni Dias, Christian Gautier, Eric Tannier, Marie-France Sagot
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MetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks.
Ludovic Cottret, David Wildridge, Florence Vinson, Michael P Barrett, Hubert Charles, Marie-France Sagot, Fabien Jourdan
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Using the “CycADS” annotation management system to develop a BioCyc metabolic network database for sequenced arthropods genomes: first steps towards “ArthropodsCyc”
Augusto Vellozo, Patrice Baa-Puyoulet, Jaime Huerta-Cepas, Gérard Febvay, Federica Calevro, Yvan Rahbé, Toni Gabaldon, Marie-France Sagot, Hubert Charles, Stefano Colella
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A note on the complexity of finding and enumerating elementary modes.
Vicente Acuña, Alberto Marchetti-Spaccamela, Marie-France Sagot, Leen Stougie
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Genome Sequence of the Pea Aphid Acyrthosiphon pisum
Iagc The International Aphid Genomics Consortium, Federica Calevro, Hubert Charles, Stefano Colella, Gérard Febvay, Caroline Anselme, Abdelaziz Heddi, Carole Vincent-Monégat, Yvan Rahbé, A. Vellozo, Marie-France Sagot, Denis Tagu