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Showing results 5421 to 5440 on 8429 in total
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Minimum ratio cover of matrix columns by extreme rays of its induced cone
Alexandre da Silva Freire, Vicente Acuña, Pierluigi Crescenzi, Carlos Eduardo Ferreira, Vincent Lacroix, Paulo Vieira Milreu, Eduardo Moreno, Marie-France Sagot
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Structural and dynamical analysis of biological networks.
Cecilia C. Klein, Andrea Marino, Marie-France Sagot, Paulo Vieira Milreu, Matteo Brilli
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Exploration of the core metabolism of symbiotic bacteria
Cecilia Coimbra Klein, Ludovic Cottret, Janice Kielbassa, Hubert Charles, Christian Gautier, Ana Tereza Ribeiro de Vasconcelos, Vincent Lacroix, Marie-France Sagot
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Sampling solution traces for the problem of sorting permutations by signed reversals
Christian Baudet, Zanoni Dias, Marie-France Sagot
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BRASERO: A resource for benchmarking RNA secondary structure comparison algorithms
Julien Allali, Cédric Saule, Cedric Chauve, Yves d'Aubenton-Carafa, Alain Denise, Christine Drevet, Pascal Ferraro, Daniel Gautheret, Claire Herrbach, Fabrice Leclerc, Antoine de Monte, Aida Ouangraoua, Marie-France Sagot, Michel Termier, Claude Thermes, Hélène Touzet
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KISSPLICE: de-novo calling alternative splicing events from RNA-seq data
Gustavo Sacomoto, Janice Kielbassa, Rayan Chikhi, Raluca Uricaru, Pavlos Antoniou, Marie-France Sagot, Pierre Peterlongo, Vincent Lacroix
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Absence of a core metabolic network common to symbiotic bacteria
Cecilia Coimbra Klein, Ludovic Cottret, Hubert Charles, Christian Gautier, Ana Tereza Ribeiro de Vasconcelos, Vincent Lacroix, Marie-France Sagot
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Finding Long and Multiple Repeats with Edit Distance
Maria Federico, Pierre Peterlongo, Nadia Pisanti, Marie-France Sagot
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“ArthropodaCyc”: a BioCyc database powered by CycADS to study and compare the metabolism of arthropods
Patrice Baa-Puyoulet, Augusto Vellozo, Jaime Huerta-Cepas, Gérard Febvay, Toni Gabaldon, Marie-France Sagot, Hubert Charles, Stefano Colella
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ArthropodaCyc: a BioCyc database powered by CycADS to study and compare the metabolism of arthropods
Patrice Baa-Puyoulet, Augusto F Vellozo, Jaime Huerta-Cepas, Gérard Febvay, T. Gabaldon, Marie-France Sagot, Hubert Charles, Stefano Colella
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Using the “CycADS” annotation management system to develop a BioCyc metabolic network database for sequenced arthropods genomes: first steps towards “ArthropodsCyc”
Patrice Baa-Puyoulet, Augusto Vellozo, Jaime Huerta-Cepas, Gérard Febvay, Toni Gabaldon, Marie-France Sagot, Hubert Charles, Stefano Colella
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Bacterial syntenies: an exact approach with gene quorum.
Yves-Pol Deniélou, Marie-France Sagot, Frédéric Boyer, Alain Viari
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Initial metabolic reconstruction of Klebsiella pneumoniae Kp13, a multidrug resistant pathogen involved in nosocomial outbreaks in Brazil
P. Ivan, Cecilia C. Klein, Ludovic Cottret, Ana T Vasconcelos, Ac Gales, Marie-France Sagot, M. Nicolas
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Close 3D proximity of evolutionary breakpoints argues for the notion of spatial synteny
Amélie Véron, Claire Lemaitre, Christian Gautier, Vincent Lacroix, Marie-France Sagot
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CycADS: an annotation database system to ease the development and update of BioCyc databases.
Augusto F Vellozo, Amélie S Véron, Patrice Baa-Puyoulet, Jaime Huerta-Cepas, Ludovic Cottret, Gérard Febvay, Federica Calevro, Yvan Rahbé, Angela E Douglas, Toni Gabaldón, Marie-France Sagot, Hubert Charles, Stefano Colella
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Metabolic network comparison of bacteria in the context of symbiosis
Cecilia C. Klein, Ludovic Cottret, Hubert Charles, Christian Gautier, Ana T Vasconcelos, Vincent Lacroix, Marie-France Sagot
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Identifying SNPs without a reference genome by comparing raw reads
Pierre Peterlongo, Nicolas Schnel, Nadia Pisanti, Marie-France Sagot, Vincent Lacroix
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A tale of genome, annotations, metabolism and phylogenomics: the pea aphid genome resources
Fabrice Legeai, Stefano Colella, Jaime Huerta-Cepas, Jean-Pierre Gauthier, Augusto Vellozo, Patrice Baa-Puyoulet, Marie-France Sagot, Toni Gabaldon, Olivier Collin, Hubert Charles, Denis Tagu
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MetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks
Ludovic Cottret, David Wildridge, Florence Vinson, Michael P. Barrett, Marie-France Sagot, Hubert Charles, Fabien Jourdan
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Cassis: detection of genomic rearrangement breakpoints.
Christian Baudet, Claire Lemaitre, Zanoni Dias, Christian Gautier, Eric Tannier, Marie-France Sagot