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Apport des nouvelles générations de séquençage pour accéder à la diversité des communautés microbiennes du sol : nécessité d’un ‘pipeline’ bio-informatique pour les biologistes
Sébastien Terrat, Richard Christen, Samuel S. Dequiedt, Pierre-Alain Maron, Christophe Mougel, Guy Perriere, Lionel Ranjard
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ReNaBi-IFB : The French Bioinformatics Infrastructure
Guy Perrière
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leBIBIQBPP: a set of databases and a webtool for automatic phylogenetic analysis of prokaryotic sequences
Jean-Pierre Flandrois, G. Perrière, Manolo Gouy
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Molecular and functional evolution of the fungal diterpene synthase genes
Marc Fischer, Camille Rustenhloz, Véronique Leh-Louis, Guy Perrière
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Evolutionary history of phosphatidylinositol- 3-kinases: ancestral origin in eukaryotes and complex duplication patterns
H. Philippon, Céline Brochier-Armanet, G. Perriere
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Analyse de 32 souches de Legionella pneumophila de sévérités variables afin d'identifier les déterminants de la pathogénicité
Amandine Campan-Fournier, Christine Oger, Christophe Ginevra, Vincent Navratil, Anne-Gaëlle Ranc, G. Perrière, Sophie Jarraud
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Qualité des données NGS : de la séquence aux bases de données
Pierre Peyret, Julie Aubert, Vincent Breton, François Enault, Line Le Gall, Denis Le Paslier, Tiphaine Martin, Guy Perriere, Eric Peyretaillade
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IsoSel: Protein Isoform Selector for phylogenetic reconstructions
H. Philippon, A. Souvane, Céline Brochier-Armanet, G. Perriere
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Genomic study of a novel magnetotactic Alphaproteobacteria uncovers the multiple ancestry of magnetotaxis
Caroline Monteil, Guy Perrière, Nicolas Menguy, Nicolas Ginet, Béatrice Alonso, Nicolas Waisbord, Stéphane Cruveiller, David Pignol, Christopher T. Lefèvre
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From conservation to structure, studies of magnetosome associated cation diffusion facilitators (CDF) proteins in Proteobacteria
Keren-Khadmy Noa, Natalie Zeytuni, Nitzan Kutnowski, Guy Perriere, Caroline Monteil, Raz Zarivachid
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Genetic structure and linkage disequilibrium in 4 species of the Vitis genus
Patrice P. This, Stephane Nicolas, Alexis Dereeper, Agnès Doligez, Jean-Pierre Peros, Roberto Bacilieri, Jean-Michel Boursiquot, Thierry Lacombe, Gilles Berger, Yves Bertrand, Amandine Launay, Catherine Roux, Didier Merdinoglu, Christine Cierco-Ayrolles, Aurélie Siberchicot, Brigitte B. Mangin, Reinhard Topfer, Eva Zyprian
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Novel measures of linkage disequilibrium that correct the bias due to population structure and relatedness
Brigitte Mangin, Aurélie Siberchicot, S. Nicolas, Agnes Doligez, Patrice This, Christine Cierco-Ayrolles
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Conference Report: Deuxièmes Rencontres R
Aurélie Siberchicot, S. Dray
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An average study of hypergraphs and their minimal transversals
Julien David, Loïck Lhote, Arnaud Mary, François Rioult
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Reconfiguration of graphs with connectivity constraints
Nicolas Bousquet, Arnaud Mary
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Efficient enumeration of solutions produced by closure operations
Arnaud Mary, Yann Strozecki
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Multiple Sequence Comparison:A Peptide Matching Approach
M-F. Sagot, Alain Viari, H. Soldano
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Finding flexible patterns in a text - An application to 3D matching
M-F. Sagot, Alain Viari, J. Pothier, H. Soldano
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Multiple sequence comparison - A peptide matching approach
Marie-France Sagot, Alain Viari, H Soldano
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Flexible Identification of Structural Objects in Nucleic Acid Sequences: Palindromes Mirror Repeats Pseudoknots and Triple Helices
M.-F. Sagot, Alain Viari