GECO Génomique Computationnelle et Evolutive

Evaluation of an expert system linked to a rapid antibiotic susceptibility testing system for the detection of β-lactam resistance phenotypes

Jean-Pierre Flandrois, G. Vedel, M. Peyret, J.P. Gayral, Patrick Millot

Research in Microbiology . 147 ( 4 ) : 297-309

DOI: 10.1016/0923-2508(96)81390-8

1996

Article dans une revue

voir la publication

The particular behaviour of Listeria monocytogenes under sub-optimal conditions

S. Bajard, L. Rosso, G. Fardel, Jean-Pierre Flandrois

International Journal of Food Microbiology . 29 : 201-211

1996

Article dans une revue

voir la publication

Use of mathematics and statistics in nutrition modelling

G Ciuperca, R Tomassone, Jp Flandrois

Annales de zootechnie . 45 ( Suppl1 ) : 143-152

1996

Article dans une revue

voir la publication

Correspondence discriminant analysis: a multivariate method for comparing classes of protein and nucleic acid sequences

G. Perrière, J.R. Lobry, J. Thioulouse

Computer Applications in the Biosciences . 12 : 519-524

1996

Article dans une revue

voir la publication

LALNVIEW: a graphical viewer for pairwise sequence alignments

L. Duret, E. Gasteiger, G. Perrière

Computer Applications in the Biosciences . 12 : 507-510

1996

Article dans une revue

voir la publication

NRSub: a non-redundant database for Bacillus subtilis

G. Perrière, I. Moszer, T. Gojobori

Nucleic Acids Research . 24 : 41-45

1996

Article dans une revue

voir la publication

Early origin of foraminifera suggested by SSU rRNA gene sequences

J. Pawlowski, I. Bolivar, J.F. Fahrni, T. Cavalier-Smith, Manolo Gouy

Molecular Biology and Evolution . 13 ( 3 ) : 445-450

DOI: 10.1093/oxfordjournals.molbev.a025605

1996

Article dans une revue

voir la publication

Sequence heterogeneities among 16S ribosomal RNA sequences, and their effect on phylogenetic analyses at the species level.

Valérie Cilia, Bénédicte Lafay, Richard Christen

Molecular Biology and Evolution . 13 ( 3 ) : 451-61

1996

Article dans une revue

voir la publication

An economic approach to the MIC.

M. Delignette-Muller, Jean-Pierre Flandrois, Catherine Chapuis

Zentralblatt fur Bakteriologie : international journal of medical microbiology . 284 ( 1 ) : 67-74

1996

Article dans une revue

voir la publication

Isolation and characterization of a cDNA encoding a chicken actin-like protein

J.J. Michaille, Manolo Gouy, Simon Blanchet, L. Duret

Gene . 154 ( 2 ) : 205-209

DOI: 10.1016/0378-1119(94)00865-P

1995

Article dans une revue

voir la publication

Searching for repeated words in a text allowing for mismatches and gaps

M-F. Sagot, V. Escalier, Alain Viari, H. Soldano

incollection . -- : 87-100

1995

Article dans une revue

voir la publication

Inferring phylogenies from DNA sequences of unequal base compositions.

N. Galtier, Manolo Gouy

Proceedings of the National Academy of Sciences of the United States of America . 92 ( 24 ) : 11317-11321

DOI: 10.1073/pnas.92.24.11317

1995

Article dans une revue

voir la publication

Relationship between colonial surface and density on agar plate

L. Rosso, Jean-Pierre Flandrois, Catherine Chapuis

The Journal of applied bacteriology . 79 ( 5 ) : 542-550

DOI: 10.1111/j.1365-2672.1995.tb03175.x

1995

Article dans une revue

voir la publication

Olecranon bursitis due toPrototheca wickerhamii, an algal opportunistic pathogen

M. Montclos, G. Chatte, M. Perrin-Fayolle, Jean-Pierre Flandrois

European Journal of Clinical Microbiology and Infectious Diseases . 14 ( 6 ) : 561-562

DOI: 10.1007/bf02113444

1995

Article dans une revue

voir la publication

The effect of incubation temperature and sodium chloride concentration on the growth kinetics of Vibrio anguillarum and Vibrio anguillarum -related organisms

Véronique Guérin-Faublée, L. Rosso, Martine Vigneulle, J.-P. Flandrois

The Journal of applied bacteriology . 78 ( 6 ) : 621-629

DOI: 10.1111/j.1365-2672.1995.tb03108.x

1995

Article dans une revue

voir la publication

Roseobacter algicola sp. nov., a new marine bacterium isolated from the phycosphere of the toxin-producing dinoflagellate Prorocentrum lima.

Bénédicte Lafay, Raymond Ruimy, Catherine Rausch de Traubenberg, Violette Breittmayer, Michel J. Gauthier, Richard Christen

International Journal of Systematic Bacteriology . 45 ( 2 ) : 290-6

1995

Article dans une revue

voir la publication

A combined morphological and molecular approach to the phylogeny of asteroids (Asteroidea: Echinodermata)

Bénédicte Lafay, Richard Christen, Andrew B. Smith

Systematic Biology . 44 ( 2 ) : 190-208

1995

Article dans une revue

voir la publication

Statistical analysis of vertebrate sequences reveals that long genes are scarce in GC-rich isochores

L. Duret, Dominique Mouchiroud, Christian Gautier

Journal of Molecular Evolution . 40 : 308-317

1995

Article dans une revue

voir la publication

Finding flexible patterns in a text - An application to 3D matching

M-F. Sagot, Alain Viari, J. Pothier, H. Soldano

Computer Applications in the Biosciences . 11 : 59-70

1995

Article dans une revue

voir la publication

Multiple Sequence Comparison:A Peptide Matching Approach

M-F. Sagot, Alain Viari, H. Soldano

incollection . 937 : 366-385

1995

Article dans une revue

voir la publication

Convenient Model To Describe the Combined Effects of Temperature and pH on Microbial Growth

L. Rosso, J.R. Lobry, S. Bajard, Jean-Pierre Flandrois

Applied and Environmental Microbiology . 61 : 610-616

1995

Article dans une revue

voir la publication

Small-subunit rRNA sequences and whole DNA relatedness concur for the reassignment of Pasteurella piscicida (Snieszko et al.) Janssen and Surgalla to the genus Photobacterium as Photobacterium damsela subsp. piscicida comb. nov.

Gilles Gauthier, Bénédicte Lafay, Raymond Ruimy, Violette Breittmayer, Jean-Louis Nicolas, Richard Christen

International Journal of Systematic Bacteriology . 45 ( 1 ) : 139-44

1995

Article dans une revue

voir la publication

Ophiuroid phylogeny and higher taxonomy: morphological, molecular and palaeontological perspectives

Andrew B. Smith, Gordon L.J. Paterson, Bénédicte Lafay

Zoological Journal of the Linnean Society . 114 : 213-243

1995

Article dans une revue

voir la publication

Accuracy of microbial growth predictions with square root and polynomial models

Jean-Pierre Flandrois, M. Delignette-Muller

International Journal of Food Microbiology . 27 ( 2-3 ) : 139-146

DOI: 10.1016/0168-1605(94)00158-3

1995

Article dans une revue

voir la publication

Rearrangement of CCND1 (BCL1/PRAD1) 3' untranslated region in mantle-cell lymphomas and t(11q13)-associated leukemias

R. Rimokh, F. Berger, C. Bastard, B. Klein, M. French, E. Archimbaud...

Blood . 83 : 3689-3696

1994

Article dans une revue

voir la publication

NRSub: a non-redundant data base for the Bacillus subtilis genome

G. Perrière, Manolo Gouy, T. Gojobori

Nucleic Acids Research . 22 ( 25 ) : 5525-5529

DOI: 10.1093/nar/22.25.5525

1994

Article dans une revue

voir la publication

Phylogenetic position of foraminifera inferred from LSU rRNA gene sequences

J. Pawlowski, I. Bolivar, J. Guiard-Maffia, Manolo Gouy

Molecular Biology and Evolution . 11 ( 6 ) : 929-938

DOI: 10.1093/oxfordjournals.molbev.a040174

1994

Article dans une revue

voir la publication

HOVERGEN: a database of homologous vertebrate genes

L. Duret, Dominique Mouchiroud, Manolo Gouy

Nucleic Acids Research . 22 ( 12 ) : 2360-2365

DOI: 10.1093/nar/22.12.2360

1994

Article dans une revue

voir la publication

Molecular Phylogenetic Analysis of Nitrobacter spp

S. Orso, Manolo Gouy, E. Navarro, P. Normand

International Journal of Systematic Bacteriology . 44 ( 1 ) : 83-86

DOI: 10.1099/00207713-44-1-83

1994

Article dans une revue

voir la publication

Heterogeneity of hepatitis C virus genotypes in France

D. Qu, O. Hantz, Manolo Gouy, L. Vitvitski, J.S. Li, F. Berby...

Journal of General Virology . 75 ( Pt 5) : 1063-1070

DOI: 10.1099/0022-1317-75-5-1063

1994

Article dans une revue

voir la publication

GECO Génomique Computationnelle et Evolutive

Equipe Bioinformatique, Phylogénie et Génomique Évolutive

Equipe Baobab

Publications

Evaluation of an expert system linked to a rapid antibiotic susceptibility testing system for the detection of β-lactam resistance phenotypes

The particular behaviour of Listeria monocytogenes under sub-optimal conditions

Use of mathematics and statistics in nutrition modelling

Correspondence discriminant analysis: a multivariate method for comparing classes of protein and nucleic acid sequences

LALNVIEW: a graphical viewer for pairwise sequence alignments

NRSub: a non-redundant database for Bacillus subtilis

Early origin of foraminifera suggested by SSU rRNA gene sequences

Sequence heterogeneities among 16S ribosomal RNA sequences, and their effect on phylogenetic analyses at the species level.

An economic approach to the MIC.

Isolation and characterization of a cDNA encoding a chicken actin-like protein

Searching for repeated words in a text allowing for mismatches and gaps

Inferring phylogenies from DNA sequences of unequal base compositions.

Relationship between colonial surface and density on agar plate

Olecranon bursitis due toPrototheca wickerhamii, an algal opportunistic pathogen

The effect of incubation temperature and sodium chloride concentration on the growth kinetics of Vibrio anguillarum and Vibrio anguillarum -related organisms

Roseobacter algicola sp. nov., a new marine bacterium isolated from the phycosphere of the toxin-producing dinoflagellate Prorocentrum lima.

A combined morphological and molecular approach to the phylogeny of asteroids (Asteroidea: Echinodermata)

Statistical analysis of vertebrate sequences reveals that long genes are scarce in GC-rich isochores

Finding flexible patterns in a text - An application to 3D matching

Multiple Sequence Comparison:A Peptide Matching Approach

Convenient Model To Describe the Combined Effects of Temperature and pH on Microbial Growth

Small-subunit rRNA sequences and whole DNA relatedness concur for the reassignment of Pasteurella piscicida (Snieszko et al.) Janssen and Surgalla to the genus Photobacterium as Photobacterium damsela subsp. piscicida comb. nov.

Ophiuroid phylogeny and higher taxonomy: morphological, molecular and palaeontological perspectives

Accuracy of microbial growth predictions with square root and polynomial models

Rearrangement of CCND1 (BCL1/PRAD1) 3' untranslated region in mantle-cell lymphomas and t(11q13)-associated leukemias

NRSub: a non-redundant data base for the Bacillus subtilis genome

Phylogenetic position of foraminifera inferred from LSU rRNA gene sequences

HOVERGEN: a database of homologous vertebrate genes

Molecular Phylogenetic Analysis of Nitrobacter spp

Heterogeneity of hepatitis C virus genotypes in France