Quantitative and Evolutionary Ecology of Communities Group
Thioulouse Jean
Directeur de recherche
CNRS
Mendel Building, 1st floor. Office 11.048
Bibliography Web page: You can visit my bibliography web page here: https://jthome.thioulouse.fr/ref/
Reproducible research : A series of paper with graphs and computations reproducibility:
https://jthome.thioulouse.fr/Reproducible_Research/
https://pbil.univ-lyon1.fr/members/thioulouse/RRBibJT/
Google Scholar: https://scholar.google.com/citations?hl=fr&user=1sjOJvSAAAAJO
ORCID ID: https://orcid.org/0000-0001-7664-05980
IdHAL: https://cv.archives-ouvertes.fr/jean-thioulouse
ade4 book: Multivariate Analysis of Ecological Data with ade4
https://link.springer.com/book/10.1007/978-1-4939-8850-1
Evol. Biol. 2021 paper reproducibility:
Overcoming the Spurious Groups Problem in Between-Group PCA
Research activity
My research activities are centred around innovation in the field of statistical methods in Biology. During the last years, I was mainly interested in statistical analysis methods used for studying bacterial diversity. I have also pursued methodological developments in software, leading to the distribution of several packages for R, and in consulting and teaching in several areas.
The ade4 package for R :ade4
The adegraphics package for R :adegraphics
The ade4TkGUI package for R :ade4TkGUI
Publications
Display of 121 to 150 publications on 153 in total
Identification of birds as biological markers along a neotropical urban-rural gradient using co-inertia analysis
Journal of Environmental Management . 59 : 121-140
Journal article
see the publicationHeterogeneous cell density and genetic structure of bacterial pools associated with various microenvironments as determined by enumeration and DNA fingerprinting approach (RISA)
Microbial ecology . 39 : 263-272
Journal article
see the publicationApproche qualitative et quantitative de l'effet de la jachère sur des populations de champignons mycorhiziens à arbuscules
Le sol, milieu vivant : fonctionnement et gestion .
Conference paper
see the publicationSusceptibility of several sahelian Acacia to Meloidogyne javanica (Treub) Chitw
Agroforestry Systems . 46 : 123-130
Journal article
see the publicationEcology of larval mosquitoes with special reference to Anopheles arabiensis (Diptera: Culcidae) in market-garden wells in urban Dakar Senegal
Journal of Medical Entomology . 35 : 948-955
Journal article
see the publicationADE-4 Software: a tool for multivariate analysis and graphical display
Océanis : Série de documents océanographiques . 24 ( 4 ) : 393-416
Book chapter
see the publicationIdentification of soil factors that relate to the structure of the plant parasitic nematode community
Applied Soil Ecology . 8 : 35-49
Journal article
see the publicationFunctional data analysis of curve asymmetry with application to the color pattern of Hydropsyche contubernalis head capsule
Biometrics . 53 : 294-305
Journal article
see the publicationADE-4: a multivariate analysis and graphical display software
Statistics and Computing . 7 : 75-83
Journal article
see the publicationNetMul a World-Wide Web user interface for multivariate analysis sofware
Computational Statistics and Data Analysis . 21 : 369-372
Journal article
see the publicationOn-line tools for sequence retrieval and multivariate statistics in molecular biology
Computer Applications in the Biosciences . 12 : 63-69
Journal article
see the publicationCorrespondence discriminant analysis: a multivariate method for comparing classes of protein and nucleic acid sequences
Computer Applications in the Biosciences . 12 : 519-524
Journal article
see the publicationTowards Better Graphics for Multivariate Analysis: the Interactive Factor Map
Computational Statistics and Data Analysis . 11 : 11-21
Journal article
see the publicationCo-inertia analysis of amino-acid physico-chemical properties and protein composition with the ADE package
Bioinformatics . 11 : 321-329
Journal article
see the publicationDE software: multivariate analysis and graphical display of environmental data
incollection . -- : 57-62
Journal article
see the publicationMultivariate analysis of spatial patterns: a unified approach to local and global structures
Environmental and Ecological Statistics . 2 : 1-14
Journal article
see the publicationChemometrical evaluation of multispecies-multichemical data by means of graphical techniques combined with multivariate analyses
Ecotoxicology and Environmental Safety . 26 : 333-345
Journal article
see the publicationEvaluation of the Precision of Systematic Sampling : Nugget Effect and Covariogram Modelling
Journal of Microscopy . 172 : 249-256
Journal article
see the publicationEvaluation of the precision of systematic sampling nugget effect and covariogram modelling
Journal of Microscopy . 172 ( 3 ) : 249-256
Journal article
see the publicationA method for reciprocal scaling of species tolerance and sample diversity
Ecology . 73 : 670-680
Journal article
see the publicationMultivariate Analysis of the Input and Output Data in the Fugacity Model Level I
incollection . -- : 281-345
Journal article
see the publicationGraphical Techniques for Multidimensional Data Analysis
incollection . -- : 153-205
Journal article
see the publicationAUTO-MODELISATION EN ANALYSE DES DONNEES
La Modélisation - Confluent des sciences . : 71-86
Book chapter
see the publicationMacMul and GraphMu: two Macintosh programs for the display and analysis of multivariate data
Computers & Geosciences . 16 ( 8 ) : 1235-1240
Journal article
see the publicationStatistical analysis and graphical display of multivariate data on the Macintosh
Computer Applications in the Biosciences . 5 : 287-292
Journal article
see the publicationTraitements nématicides et peuplement de nématodes parasites de la canne à sucre au Burkina Faso. 1. Repousses
Revue de Nématologie . 12 ( 1 ) : 35-44
Journal article
see the publicationLes analyses multitableaux en ecologie factorielle.
Acta Oecologica, Oecologia Generalis . 8 ( 4 ) : 463-480
Journal article
see the publicationSpace-Time Structure in a Winter Rape Pest Population Psylliodes chrysocephala (Col. chrysomelidae): methodological proposals and biological interpretations
Journal of Applied Ecology . 24 : 435-450
Journal article
see the publicationLES POPULATIONS NATURELLES D'INSECTES: EXISTENCE DE STRUCTURES SPATIALES ET TEMPORELLES, LEUR ROLE DANS LA BIOLOGIE DES POPULATIONS
Coll. Nat. CNRS "Biologie des Populations" . : 90-97
Conference paper
see the publicationSTATISTICS TO FIND SPATIAL AND TEMPORAL STRUCTURES IN POPULATIONS
Pest Control: Operations and Systems Analysis in Fruit Fly Management. . : 263-282
Book chapter
see the publication