Evolutionary Epidemiology Group

Population genetics as a tool for conservation biology: defining management units for the greater horseshoe bat

Orianne Tournayre, J. B. Pons, M. Leuchtmann, Raphaël Leblois, Sylvain Piry, O. Filippi-Codaccioni...

8. European Congress of Mammalogy .

2019

Conference paper

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Integrating population genetics to define conservation units from the core to the edge of Rhinolophus ferrumequinum western range

Orianne Tournayre, Jean-Baptiste Pons, Maxime Leuchtmann, Raphaël Leblois, Sylvain Piry, Ondine Filippi-Codaccioni...

Ecology and Evolution . 9 : 2272–12290

DOI: 10.1002/ece3.5714

2019

Journal article

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Evolution of Hepatitis B Virus Receptor NTCP Reveals Differential Pathogenicities and Species Specificities of Hepadnaviruses in Primates, Rodents, and Bats

Stéphanie Jacquet, Jean-Baptiste Pons, Ariel de Bernardo, Barthélémy Ngoubangoye, Cosset François-Loïc, Corinne Régis...

Journal of Virology . 93 ( 5 )

DOI: 10.1128/JVI.01738-18

2019

Journal article

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Absence of paramyxovirus RNA in non-human primate sanctuaries and a primatology center in Gabon

Barthélémy Ngoubangoye, Gael Darren Maganga, Larson Boundenga, Thierry Audrey Tsoumbou, Virginie Rougeron, Illich Manfred Mombo...

Journal of Epidemiological Research . 5 ( 2 ) : 6

DOI: 10.5430/jer.v5n2p6

2019

Journal article

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The One health concept : 10 years old and a long road ahead

Delphine Destoumieux-Garzón, Patrick Mavingui, Gilles Boëtsch, Jérôme Boissier, Frédéric Darriet, Priscilla Duboz...

Frontiers in Veterinary Science . 5 : 14

DOI: 10.3389/fvets.2018.00014

2018

Journal article

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Coexistence of two sympatric cryptic bat species in French Guiana: insights from genetic, acoustic and ecological data

Ondine Filippi-Codaccioni, Marie-Pauline Beugin, Damien de Vienne, Elodie Portanier, David Fouchet, Cecile Kaerle...

BMC Evolutionary Biology . 18 ( 1 ) : 175

DOI: 10.1186/s12862-018-1289-8

2018

Journal article

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Conservation et écologie du Grand rhinolophe: Que nous apprennent les analyses moléculaires?

Orianne Tournayre, J. B. Pons, M. Leuchtmann, J. Duhayer, Maxime Galan, Anne Loiseau...

17. Rencontre Nationale des Chauves-Souris .

2018

Conference paper

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Coping with change in predation risk across space and time through complementary behavioral responses

Pierrick Blanchard, Christine Lauzeral, Simon Chamaillé-Jammes, Clément Brunet, Arnaud Lec’hvien, Guillaume Péron...

BMC Ecology . 18 ( 1 )

DOI: 10.1186/s12898-018-0215-7

2018

Journal article

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Metabarcoding for the parallel identification of several hundred predators and their prey: Application to bat species diet analysis

Maxime Galan, Jean-Baptiste Pons, Orianne Tournayre, Eric Pierre, Maxime Leuchtmann, Dominique Pontier...

Molecular Ecology Resources . 18 ( 3 ) : 474-489

DOI: 10.1111/1755-0998.12749

2018

Journal article

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Coexistence of two sympatric cryptic bat species in French Guiana: insights from genetic, acoustic and ecological data

Ondine Filippi-Codaccioni, Marie-Pauline Beugin, Damien de Vienne, Elodie Portanier, David Fouchet, Cécile Kaerle...

BMC Evolutionary Biology . 18 ( 1 )

DOI: 10.1186/s12862-018-1289-8

2018

Journal article

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Coexistence de deux espèces cryptiques de chauves-souris en Guyane française : apprentissages à partir de la génétique de l’acoustique et de l’écologie

Ondine Filippi-Codaccioni, Marie-Pauline Beugin, Damien M. de Vienne, Elodie Portanier, David Fouchet, Cécile Kaerle...

Plume de Naturalistes . 2 : 169-190

2018

Journal article

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Spatio-temporal variation of the greater horseshoe bat (Rhinolophus ferrumequinum) diet in Western France: applications to chirosurveillance and conservation strategies

Orianne Tournayre, Maxime Galan, Jean-Baptiste Pons, Maxime Leuchtmann, Dominique Pontier, Nathalie Charbonnel

International Conference on Ecological Sciences (Sfécologie 2018) .

2018

Conference paper

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The greater horseshoe bat (Rhinolophus ferrumequinum) diet : Optimisation of arthropods DNA identification in guano samples

Orianne Tournayre, Maxime Galan, Jean-Baptiste Pons, Maxime Leuchtmann, Jean-Claude Streito, Dominique Pontier...

International Conference on Ecological Sciences (Sfécologie 2018) .

2018

Conference paper

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Chauves-souris et services écosystémiques : que nous apprend l'ADN contenu dans le guano?

Orianne Tournayre, Maxime Galan, Jean-Baptiste Pons, Eric Pierre, Maxime Leuchtmann, Dominique Pontier...

Congrès Ecolo’Tech .

2018

Conference paper

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A single multiplex of twelve microsatellite markers for the simultaneous study of the brown hare (Lepus europaeus) and the mountain hare (Lepus timidus)

M.P. Beugin, J. Letty, C. Kaerle, J.S. Guitton, L. Muselet, G. Queney...

Ecology and Evolution . 7 : 3931-3939

DOI: 10.1002/ece3.2943

2017

Journal article

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Metabarcoding for the parallel identification of several hundred bats and their preys

Orianne Tournayre, Maxime Galan, J. B. Pons, Eric Pierre, M. Leuchtmann, D. Pontier...

10. Rencontres chiroptères du grand sud .

2017

Conference paper

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Landscape population genetics of the greater horse-shoe bat (R. ferrumequinum) in West-Eastern France

Orianne Tournayre, Anne Loiseau, Maxime Galan, J. B. Pons, M. Leuchtmann, Raphaël Leblois...

14. European Bat Research Symposium .

2017

Conference paper

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Population genetics of the greater horseshoe bat (R. ferrumequinum) in Western France

Orianne Tournayre, Anne Loiseau, M. Galan, J.B. Pons, M. Leuchtmann, Raphaël Leblois...

14. European Bat Research Symposium .

2017

Conference paper

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Ecological networks to unravel the routes to horizontal transposon transfers

Samuel Venner, Vincent Miele, Christophe Terzian, Christian Biemont, Vincent Daubin, Cedric Feschotte...

PLoS Biology . 15 ( 2 ) : np

DOI: 10.1371/journal.pbio.2001536

2017

Journal article

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Ecologie de la santé

Stéphane Blanc, - Gilles Boëtsch, Martine Hossaert-Mckey, François Renaud, Stephanie Thiebault, Hélène Broutin...

ISBN: 9782749154251 9782749154251 : 176 p.

2017

Book

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Female in the inside, male in the outside: insights into the spatial organization of a European wildcat population

Mp. Beugin, G. Leblanc, G. Queney, E. Natoli, D. Pontier

Conservation Genetics . 17 : 1405-1415

DOI: 10.1007/s10592-016-0871-0

2016

Journal article

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Analyzing the proximity to cover in a landscape of fear: a new approach applied to fine-scale habitat use by rabbits facing feral cat predation on Kerguelen archipelago

Pierrick Blanchard, Christine Lauzeral, Simon Chamaillé-Jammes, N. G. Yoccoz, D. Pontier

PeerJ . 4 : e1769

DOI: 10.7717/peerj.1769

2016

Journal article

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Bioecological Drivers of Rabies Virus Circulation in a Neotropical Bat Community

Benoit de Thoisy, Hervé Bourhy, Marguerite Delaval, Dominique Pontier, Laurent Dacheux, Edith Darcissac...

PLoS Neglected Tropical Diseases . 10 ( 1 ) : e0004378

DOI: 10.1371/journal.pntd.0004378.s002

2016

Journal article

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An R package for analyzing survival using continuous-time open capture-recapture models

D. Fouchet, H. Santin-Janin, F. Sauvage, Ng. Yoccoz, D. Pontier

Methods in Ecology and Evolution . 7 : 518-528

DOI: 10.1111/2041-210x.12497

2016

Journal article

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The host specificity of ape malaria parasites can be broken in confined environments

Barthélémy Ngoubangoye, Larson Boundenga, Céline Arnathau, Illich Manfred Mombo, Durand Patrick, Thierry-Audrey Tsoumbou...

International Journal for Parasitology . 46 ( 11 ) : 737-744

DOI: 10.1016/j.ijpara.2016.06.004

2016

Journal article

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Quantifying the role of weather on seasonal influenza

M. Roussel, D. Pontier, J.M. Cohen, B. Lina, D. Fouchet

BMC Public Health . 16 : 441

DOI: 10.1186/s12889-016-3114-x

2016

Journal article

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Le raisonnement évolutionniste en médecine

Luc. Périno, Jean-François Lemaître, D. Pontier

Médecine . : 122-127

DOI: 10.1684/med.2016.35

2016

Journal article

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Complete Genome and Phylogeny of Puumala Hantavirus Isolates Circulating in France

Guillaume Castel, Mathilde Couteaudier, Frank Sauvage, Jean-Baptiste Pons, Séverine Murri, Angelina Plyusnina...

Viruses . 7 ( 10 ) : 5476-5488

DOI: 10.3390/v7102884

2015

Journal article

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Parasite-Parasite Interactions in the Wild: How To Detect Them?

Eléonore Hellard, David Fouchet, Fabrice Vavre, Dominique Pontier

Trends in Parasitology .

2015

Journal article

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Unknown age in health disorders: A method to account for its cumulative effect and an application to feline viruses interactions.

Eléonore Hellard, Dominique Pontier, Aurélie Siberchicot, Frank Sauvage, David Fouchet

Epidemics . 11 : 48-55

DOI: 10.1016/j.epidem.2015.02.004

2015

Journal article

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Evolutionary Epidemiology Group

Members

Belateche Lilia

Lecorvaisier Florian

Pontier Dominique

Sauvage Frank

Publications

Population genetics as a tool for conservation biology: defining management units for the greater horseshoe bat

Integrating population genetics to define conservation units from the core to the edge of Rhinolophus ferrumequinum western range

Evolution of Hepatitis B Virus Receptor NTCP Reveals Differential Pathogenicities and Species Specificities of Hepadnaviruses in Primates, Rodents, and Bats

Absence of paramyxovirus RNA in non-human primate sanctuaries and a primatology center in Gabon

The One health concept : 10 years old and a long road ahead

Coexistence of two sympatric cryptic bat species in French Guiana: insights from genetic, acoustic and ecological data

Conservation et écologie du Grand rhinolophe: Que nous apprennent les analyses moléculaires?

Coping with change in predation risk across space and time through complementary behavioral responses

Metabarcoding for the parallel identification of several hundred predators and their prey: Application to bat species diet analysis

Coexistence of two sympatric cryptic bat species in French Guiana: insights from genetic, acoustic and ecological data

Coexistence de deux espèces cryptiques de chauves-souris en Guyane française : apprentissages à partir de la génétique de l’acoustique et de l’écologie

Spatio-temporal variation of the greater horseshoe bat (Rhinolophus ferrumequinum) diet in Western France: applications to chirosurveillance and conservation strategies

The greater horseshoe bat (Rhinolophus ferrumequinum) diet : Optimisation of arthropods DNA identification in guano samples

Chauves-souris et services écosystémiques : que nous apprend l'ADN contenu dans le guano?

A single multiplex of twelve microsatellite markers for the simultaneous study of the brown hare (Lepus europaeus) and the mountain hare (Lepus timidus)

Metabarcoding for the parallel identification of several hundred bats and their preys

Landscape population genetics of the greater horse-shoe bat (R. ferrumequinum) in West-Eastern France

Population genetics of the greater horseshoe bat (R. ferrumequinum) in Western France

Ecological networks to unravel the routes to horizontal transposon transfers

Ecologie de la santé

Female in the inside, male in the outside: insights into the spatial organization of a European wildcat population

Analyzing the proximity to cover in a landscape of fear: a new approach applied to fine-scale habitat use by rabbits facing feral cat predation on Kerguelen archipelago

Bioecological Drivers of Rabies Virus Circulation in a Neotropical Bat Community

An R package for analyzing survival using continuous-time open capture-recapture models

The host specificity of ape malaria parasites can be broken in confined environments

Quantifying the role of weather on seasonal influenza

Le raisonnement évolutionniste en médecine

Complete Genome and Phylogeny of Puumala Hantavirus Isolates Circulating in France

Parasite-Parasite Interactions in the Wild: How To Detect Them?

Unknown age in health disorders: A method to account for its cumulative effect and an application to feline viruses interactions.

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