Evolutionary Epidemiology Group

Coexistence of two sympatric cryptic bat species in French Guiana: insights from genetic, acoustic and ecological data

Ondine Filippi-Codaccioni, Marie-Pauline Beugin, Damien de Vienne, Elodie Portanier, David Fouchet, Cecile Kaerle...

BMC Evolutionary Biology . 18 ( 1 ) : 175

DOI: 10.1186/s12862-018-1289-8

2018

Journal article

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Conservation et écologie du Grand rhinolophe: Que nous apprennent les analyses moléculaires?

Orianne Tournayre, J. B. Pons, M. Leuchtmann, J. Duhayer, Maxime Galan, Anne Loiseau...

17. Rencontre Nationale des Chauves-Souris .

2018

Conference paper

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Coping with change in predation risk across space and time through complementary behavioral responses

Pierrick Blanchard, Christine Lauzeral, Simon Chamaillé-Jammes, Clément Brunet, Arnaud Lec’hvien, Guillaume Péron...

BMC Ecology . 18 ( 1 )

DOI: 10.1186/s12898-018-0215-7

2018

Journal article

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Metabarcoding for the parallel identification of several hundred predators and their prey: Application to bat species diet analysis

Maxime Galan, Jean-Baptiste Pons, Orianne Tournayre, Eric Pierre, Maxime Leuchtmann, Dominique Pontier...

Molecular Ecology Resources . 18 ( 3 ) : 474-489

DOI: 10.1111/1755-0998.12749

2018

Journal article

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Coexistence of two sympatric cryptic bat species in French Guiana: insights from genetic, acoustic and ecological data

Ondine Filippi-Codaccioni, Marie-Pauline Beugin, Damien de Vienne, Elodie Portanier, David Fouchet, Cécile Kaerle...

BMC Evolutionary Biology . 18 ( 1 )

DOI: 10.1186/s12862-018-1289-8

2018

Journal article

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Coexistence de deux espèces cryptiques de chauves-souris en Guyane française : apprentissages à partir de la génétique de l’acoustique et de l’écologie

Ondine Filippi-Codaccioni, Marie-Pauline Beugin, Damien M. de Vienne, Elodie Portanier, David Fouchet, Cécile Kaerle...

Plume de Naturalistes . 2 : 169-190

2018

Journal article

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Spatio-temporal variation of the greater horseshoe bat (Rhinolophus ferrumequinum) diet in Western France: applications to chirosurveillance and conservation strategies

Orianne Tournayre, Maxime Galan, Jean-Baptiste Pons, Maxime Leuchtmann, Dominique Pontier, Nathalie Charbonnel

International Conference on Ecological Sciences (Sfécologie 2018) .

2018

Conference paper

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The greater horseshoe bat (Rhinolophus ferrumequinum) diet : Optimisation of arthropods DNA identification in guano samples

Orianne Tournayre, Maxime Galan, Jean-Baptiste Pons, Maxime Leuchtmann, Jean-Claude Streito, Dominique Pontier...

International Conference on Ecological Sciences (Sfécologie 2018) .

2018

Conference paper

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Chauves-souris et services écosystémiques : que nous apprend l'ADN contenu dans le guano?

Orianne Tournayre, Maxime Galan, Jean-Baptiste Pons, Eric Pierre, Maxime Leuchtmann, Dominique Pontier...

Congrès Ecolo’Tech .

2018

Conference paper

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A single multiplex of twelve microsatellite markers for the simultaneous study of the brown hare (Lepus europaeus) and the mountain hare (Lepus timidus)

M.P. Beugin, J. Letty, C. Kaerle, J.S. Guitton, L. Muselet, G. Queney...

Ecology and Evolution . 7 : 3931-3939

DOI: 10.1002/ece3.2943

2017

Journal article

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Metabarcoding for the parallel identification of several hundred bats and their preys

Orianne Tournayre, Maxime Galan, J. B. Pons, Eric Pierre, M. Leuchtmann, D. Pontier...

10. Rencontres chiroptères du grand sud .

2017

Conference paper

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Landscape population genetics of the greater horse-shoe bat (R. ferrumequinum) in West-Eastern France

Orianne Tournayre, Anne Loiseau, Maxime Galan, J. B. Pons, M. Leuchtmann, Raphaël Leblois...

14. European Bat Research Symposium .

2017

Conference paper

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Population genetics of the greater horseshoe bat (R. ferrumequinum) in Western France

Orianne Tournayre, Anne Loiseau, M. Galan, J.B. Pons, M. Leuchtmann, Raphaël Leblois...

14. European Bat Research Symposium .

2017

Conference paper

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Ecological networks to unravel the routes to horizontal transposon transfers

Samuel Venner, Vincent Miele, Christophe Terzian, Christian Biemont, Vincent Daubin, Cedric Feschotte...

PLoS Biology . 15 ( 2 ) : np

DOI: 10.1371/journal.pbio.2001536

2017

Journal article

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Ecologie de la santé

Stéphane Blanc, - Gilles Boëtsch, Martine Hossaert-Mckey, François Renaud, Stephanie Thiebault, Hélène Broutin...

ISBN: 9782749154251 9782749154251 : 176 p.

2017

Book

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Female in the inside, male in the outside: insights into the spatial organization of a European wildcat population

Mp. Beugin, G. Leblanc, G. Queney, E. Natoli, D. Pontier

Conservation Genetics . 17 : 1405-1415

DOI: 10.1007/s10592-016-0871-0

2016

Journal article

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Analyzing the proximity to cover in a landscape of fear: a new approach applied to fine-scale habitat use by rabbits facing feral cat predation on Kerguelen archipelago

P. Blanchard, C. Lauzeral, Simon Chamaillé-Jammes, N. G. Yoccoz, D. Pontier

PeerJ . 4 : e1769

DOI: 10.7717/peerj.1769

2016

Journal article

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Bioecological Drivers of Rabies Virus Circulation in a Neotropical Bat Community

Benoit de Thoisy, Hervé Bourhy, Marguerite Delaval, Dominique Pontier, Laurent Dacheux, Edith Darcissac...

PLoS Neglected Tropical Diseases . 10 ( 1 ) : e0004378

DOI: 10.1371/journal.pntd.0004378.s002

2016

Journal article

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An R package for analyzing survival using continuous-time open capture-recapture models

D. Fouchet, H. Santin-Janin, F. Sauvage, Ng. Yoccoz, D. Pontier

Methods in Ecology and Evolution . 7 : 518-528

DOI: 10.1111/2041-210x.12497

2016

Journal article

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The host specificity of ape malaria parasites can be broken in confined environments

Barthélémy Ngoubangoye, Larson Boundenga, Céline Arnathau, Illich Manfred Mombo, Durand Patrick, Thierry-Audrey Tsoumbou...

International Journal for Parasitology . 46 ( 11 ) : 737-744

DOI: 10.1016/j.ijpara.2016.06.004

2016

Journal article

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Quantifying the role of weather on seasonal influenza

M. Roussel, D. Pontier, J.M. Cohen, B. Lina, D. Fouchet

BMC Public Health . 16 : 441

DOI: 10.1186/s12889-016-3114-x

2016

Journal article

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Le raisonnement évolutionniste en médecine

Luc. Périno, Jean-François Lemaître, D. Pontier

Médecine . : 122-127

DOI: 10.1684/med.2016.35

2016

Journal article

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Complete Genome and Phylogeny of Puumala Hantavirus Isolates Circulating in France

Guillaume Castel, Mathilde Couteaudier, Frank Sauvage, Jean-Baptiste Pons, Séverine Murri, Angelina Plyusnina...

Viruses . 7 ( 10 ) : 5476-5488

DOI: 10.3390/v7102884

2015

Journal article

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Parasite-Parasite Interactions in the Wild: How To Detect Them?

Eléonore Hellard, David Fouchet, Fabrice Vavre, Dominique Pontier

Trends in Parasitology .

2015

Journal article

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Unknown age in health disorders: A method to account for its cumulative effect and an application to feline viruses interactions.

Eléonore Hellard, Dominique Pontier, Aurélie Siberchicot, Frank Sauvage, David Fouchet

Epidemics . 11 : 48-55

DOI: 10.1016/j.epidem.2015.02.004

2015

Journal article

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Modes of transmission of Simian T-lymphotropic Virus Type 1 in semi-captive mandrills (Mandrillus sphinx)

M. Roussel, D. Pontier, B. Ngoubangoye, M. Kazanji, D. Verrier, D. Fouchet

Veterinary Microbiology . 179 : 155-61

DOI: 10.1016/j.vetmic.2015.06.010

2015

Journal article

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Behavioural and physiological indicators of shelter dogs' welfare: Reflections on the no-kill policy on free-ranging dogs in Italy revisited on the basis of 15 years of implementation

S. Cafazzo, L. Maragliano, R. Bonanni, F. Scholl, M. Guarducci, R. Scarcella...

Physiology & behavior . 133 : 223-9

DOI: 10.1016/j.physbeh.2014.05.046

2014

Journal article

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Exploration forays in juvenile European hares (Lepus europaeus): dispersal preludes or hunting-induced troubles?

Alexis Avril, Jérôme Letty, Yves Léonard, Dominique Pontier

BMC Ecology . 14 : 6

DOI: 10.1186/1472-6785-14-6

2014

Journal article

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Accounting for sampling error when inferring population synchrony from time-series data: a bayesian state-space modelling approach with applications

H. Santin-Janin, B. Hugueny, P. Aubry, David Fouchet, O. Gimenez, D. Pontier

PLoS ONE . 9 : e87084

DOI: 10.1371/journal.pone.0087084

2014

Journal article

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Early infections by myxoma virus of young rabbits (Oryctolagus cuniculus) protected by maternal antibodies activate their immune system and enhance herd immunity in wild populations.

Stéphane Marchandeau, Dominique Pontier, Jean-Sébastien Guitton, Jérôme Letty, David Fouchet, Jacky Aubineau...

Veterinary Research . 45 ( 1 ) : 26

DOI: 10.1186/1297-9716-45-26

2014

Journal article

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Evolutionary Epidemiology Group

Members

Belateche Lilia

Lecorvaisier Florian

Pontier Dominique

Puppo Costanza

Sauvage Frank

Varoux Mary

Publications

Coexistence of two sympatric cryptic bat species in French Guiana: insights from genetic, acoustic and ecological data

Conservation et écologie du Grand rhinolophe: Que nous apprennent les analyses moléculaires?

Coping with change in predation risk across space and time through complementary behavioral responses

Metabarcoding for the parallel identification of several hundred predators and their prey: Application to bat species diet analysis

Coexistence of two sympatric cryptic bat species in French Guiana: insights from genetic, acoustic and ecological data

Coexistence de deux espèces cryptiques de chauves-souris en Guyane française : apprentissages à partir de la génétique de l’acoustique et de l’écologie

Spatio-temporal variation of the greater horseshoe bat (Rhinolophus ferrumequinum) diet in Western France: applications to chirosurveillance and conservation strategies

The greater horseshoe bat (Rhinolophus ferrumequinum) diet : Optimisation of arthropods DNA identification in guano samples

Chauves-souris et services écosystémiques : que nous apprend l'ADN contenu dans le guano?

A single multiplex of twelve microsatellite markers for the simultaneous study of the brown hare (Lepus europaeus) and the mountain hare (Lepus timidus)

Metabarcoding for the parallel identification of several hundred bats and their preys

Landscape population genetics of the greater horse-shoe bat (R. ferrumequinum) in West-Eastern France

Population genetics of the greater horseshoe bat (R. ferrumequinum) in Western France

Ecological networks to unravel the routes to horizontal transposon transfers

Ecologie de la santé

Female in the inside, male in the outside: insights into the spatial organization of a European wildcat population

Analyzing the proximity to cover in a landscape of fear: a new approach applied to fine-scale habitat use by rabbits facing feral cat predation on Kerguelen archipelago

Bioecological Drivers of Rabies Virus Circulation in a Neotropical Bat Community

An R package for analyzing survival using continuous-time open capture-recapture models

The host specificity of ape malaria parasites can be broken in confined environments

Quantifying the role of weather on seasonal influenza

Le raisonnement évolutionniste en médecine

Complete Genome and Phylogeny of Puumala Hantavirus Isolates Circulating in France

Parasite-Parasite Interactions in the Wild: How To Detect Them?

Unknown age in health disorders: A method to account for its cumulative effect and an application to feline viruses interactions.

Modes of transmission of Simian T-lymphotropic Virus Type 1 in semi-captive mandrills (Mandrillus sphinx)

Behavioural and physiological indicators of shelter dogs' welfare: Reflections on the no-kill policy on free-ranging dogs in Italy revisited on the basis of 15 years of implementation

Exploration forays in juvenile European hares (Lepus europaeus): dispersal preludes or hunting-induced troubles?

Accounting for sampling error when inferring population synchrony from time-series data: a bayesian state-space modelling approach with applications

Early infections by myxoma virus of young rabbits (Oryctolagus cuniculus) protected by maternal antibodies activate their immune system and enhance herd immunity in wild populations.

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