GECO Evolutionary and Computational Genomics

Bioinformatics, Phylogeny and Evolutionary Genomics Group

Baobab Group

Publications

Display of 1081 to 1110 publications on 1197 in total

The particular behaviour of Listeria monocytogenes under sub-optimal conditions

S. Bajard, L. Rosso, G. Fardel, Jean-Pierre Flandrois

International Journal of Food Microbiology . 29 : 201-211

Journal article

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Use of mathematics and statistics in nutrition modelling

G Ciuperca, R Tomassone, Jp Flandrois

Annales de zootechnie . 45 ( Suppl1 ) : 143-152

Journal article

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Correspondence discriminant analysis: a multivariate method for comparing classes of protein and nucleic acid sequences

G. Perrière, J.R. Lobry, J. Thioulouse

Computer Applications in the Biosciences . 12 : 519-524

Journal article

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LALNVIEW: a graphical viewer for pairwise sequence alignments

L. Duret, E. Gasteiger, G. Perrière

Computer Applications in the Biosciences . 12 : 507-510

Journal article

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NRSub: a non-redundant database for Bacillus subtilis

G. Perrière, I. Moszer, T. Gojobori

Nucleic Acids Research . 24 : 41-45

Journal article

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Sequence heterogeneities among 16S ribosomal RNA sequences, and their effect on phylogenetic analyses at the species level.

Valérie Cilia, Bénédicte Lafay, Richard Christen

Molecular Biology and Evolution . 13 ( 3 ) : 451-61

Journal article

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An economic approach to the MIC.

M. Delignette-Muller, Jean-Pierre Flandrois, Catherine Chapuis

Zentralblatt fur Bakteriologie : international journal of medical microbiology . 284 ( 1 ) : 67-74

Journal article

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Isolation and characterization of a cDNA encoding a chicken actin-like protein

J.J. Michaille, Manolo Gouy, Simon Blanchet, L. Duret

Gene . 154 ( 2 ) : 205-209

DOI: 10.1016/0378-1119(94)00865-P

Journal article

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Searching for repeated words in a text allowing for mismatches and gaps

M-F. Sagot, V. Escalier, Alain Viari, H. Soldano

incollection . -- : 87-100

Journal article

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Inferring phylogenies from DNA sequences of unequal base compositions.

N. Galtier, Manolo Gouy

Proceedings of the National Academy of Sciences of the United States of America . 92 ( 24 ) : 11317-11321

DOI: 10.1073/pnas.92.24.11317

Journal article

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Olecranon bursitis due toPrototheca wickerhamii, an algal opportunistic pathogen

M. Montclos, G. Chatte, M. Perrin-Fayolle, Jean-Pierre Flandrois

European Journal of Clinical Microbiology and Infectious Diseases . 14 ( 6 ) : 561-562

DOI: 10.1007/bf02113444

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The effect of incubation temperature and sodium chloride concentration on the growth kinetics of Vibrio anguillarum and Vibrio anguillarum -related organisms

Véronique Guérin-Faublée, L. Rosso, Martine Vigneulle, J.-P. Flandrois

The Journal of applied bacteriology . 78 ( 6 ) : 621-629

DOI: 10.1111/j.1365-2672.1995.tb03108.x

Journal article

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Roseobacter algicola sp. nov., a new marine bacterium isolated from the phycosphere of the toxin-producing dinoflagellate Prorocentrum lima.

Bénédicte Lafay, Raymond Ruimy, Catherine Rausch de Traubenberg, Violette Breittmayer, Michel J. Gauthier, Richard Christen

International Journal of Systematic Bacteriology . 45 ( 2 ) : 290-6

Journal article

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A combined morphological and molecular approach to the phylogeny of asteroids (Asteroidea: Echinodermata)

Bénédicte Lafay, Richard Christen, Andrew B. Smith

Systematic Biology . 44 ( 2 ) : 190-208

Journal article

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Statistical analysis of vertebrate sequences reveals that long genes are scarce in GC-rich isochores

L. Duret, Dominique Mouchiroud, Christian Gautier

Journal of Molecular Evolution . 40 : 308-317

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Finding flexible patterns in a text - An application to 3D matching

M-F. Sagot, Alain Viari, J. Pothier, H. Soldano

Computer Applications in the Biosciences . 11 : 59-70

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Multiple Sequence Comparison:A Peptide Matching Approach

M-F. Sagot, Alain Viari, H. Soldano

incollection . 937 : 366-385

Journal article

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Convenient Model To Describe the Combined Effects of Temperature and pH on Microbial Growth

L. Rosso, J.R. Lobry, S. Bajard, Jean-Pierre Flandrois

Applied and Environmental Microbiology . 61 : 610-616

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Small-subunit rRNA sequences and whole DNA relatedness concur for the reassignment of Pasteurella piscicida (Snieszko et al.) Janssen and Surgalla to the genus Photobacterium as Photobacterium damsela subsp. piscicida comb. nov.

Gilles Gauthier, Bénédicte Lafay, Raymond Ruimy, Violette Breittmayer, Jean-Louis Nicolas, Richard Christen

International Journal of Systematic Bacteriology . 45 ( 1 ) : 139-44

Journal article

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Ophiuroid phylogeny and higher taxonomy: morphological, molecular and palaeontological perspectives

Andrew B. Smith, Gordon L.J. Paterson, Bénédicte Lafay

Zoological Journal of the Linnean Society . 114 : 213-243

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Accuracy of microbial growth predictions with square root and polynomial models

Jean-Pierre Flandrois, M. Delignette-Muller

International Journal of Food Microbiology . 27 ( 2-3 ) : 139-146

DOI: 10.1016/0168-1605(94)00158-3

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Rearrangement of CCND1 (BCL1/PRAD1) 3' untranslated region in mantle-cell lymphomas and t(11q13)-associated leukemias

R. Rimokh, F. Berger, C. Bastard, B. Klein, M. French, E. Archimbaud...

Blood . 83 : 3689-3696

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NRSub: a non-redundant data base for the Bacillus subtilis genome

G. Perrière, Manolo Gouy, T. Gojobori

Nucleic Acids Research . 22 ( 25 ) : 5525-5529

DOI: 10.1093/nar/22.25.5525

Journal article

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HOVERGEN: a database of homologous vertebrate genes

L. Duret, Dominique Mouchiroud, Manolo Gouy

Nucleic Acids Research . 22 ( 12 ) : 2360-2365

DOI: 10.1093/nar/22.12.2360

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Molecular Phylogenetic Analysis of Nitrobacter spp

S. Orso, Manolo Gouy, E. Navarro, P. Normand

International Journal of Systematic Bacteriology . 44 ( 1 ) : 83-86

DOI: 10.1099/00207713-44-1-83

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Heterogeneity of hepatitis C virus genotypes in France

D. Qu, O. Hantz, Manolo Gouy, L. Vitvitski, J.S. Li, F. Berby...

Journal of General Virology . 75 ( Pt 5) : 1063-1070

DOI: 10.1099/0022-1317-75-5-1063

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Phylogenetic analysis and assessment of the genera Vibrio, Photobacterium, Aeromonas, and Plesiomonas deduced from small-subunit rRNA sequences.

Raymond Ruimy, Violette Breittmayer, Philippe Elbaze, Bénédicte Lafay, Odile Boussemart, Michel Gautier...

International Journal of Systematic Bacteriology . 44 ( 3 ) : 416-26

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