Penel Simon

Ingénieur d'études

CNRS

Address: 43 bd du 11 novembre 1918
69622 VILLEURBANNE cedex

Intérêts :

Phylogénomique, génomique comparative, coévolution multi-échelle, réconciliation phylogénétique, représentation d'arbres, clustering de séquences, web.

Base de données HOGENOM : http://hogenom.univ-lyon1.fr/

Logiciel Thirdkind : https://github.com/simonpenel/thirdkind/wiki

Développement:

https://github.com/simonpenel

https://gitlab.in2p3.fr/penel

Rust :

https://crates.io/crates/light_phylogeny

https://crates.io/crates/thirdkind

Node.js, D3.js, Docker :

https://gitlab.in2p3.fr/penel/docker-hogenom-compose

Participation à d'autres projets :

https://gitlab.com/vmiele/silix/

https://project.inria.fr/treerecs/

Formation:

Université Joseph Fourrier, Grenoble

https://www.theses.fr/1997GRE10132

Publications

Display of 31 to 36 publications on 36 in total

Determination of alpha-helix N1 energies after addition of N1 N2 and N3 preferences to helix/coil theory

J.K. Sun, Simon Penel, A.J. Doig

Protein Science . 9 : 750-754

2000

Journal article

see the publication

Periodicity in alpha-helix lengths and C-capping preferences

Simon Penel, R.G. Morrison, R.J. Mortishire-Smith, A.J. Doig

Journal of Molecular Biology . 293 : 1211-1219

1999

Journal article

see the publication

Side-chain structures in the first turn of the alpha-helix

Simon Penel, E. Hughes, A.J. Doig

Journal of Molecular Biology . 287 : 127-143

1999

Journal article

see the publication

Detergent binding in trigonal crystals of OmpF porin from Escherichia coli

Simon Penel, E. Pebay-Peyroula, J. Rosenbusch, G. Rummel, T. Schirmer, P.A. Timmins

Biochimie . 80 : 543-551

1998

Journal article

see the publication

Neutron crystallographic evidence of lipase-colipase complex activation by a micelle

J. Hermoso, D. Pignol, Simon Penel, M. Roth, C. Chapus, J.C. Fontecillacamps

EMBO Journal . 16 : 5531-5536

1997

Journal article

see the publication

MAINDEX - manual indexation for area-detector crystallographic data

Simon Penel, P. Legrand

Journal of Applied Crystallography . 30 : 206-206

1997

Journal article

see the publication