Technical services

Computing services

Veber Philippe

Ingénieur de recherche

CNRS

Address: 43 bd du 11 novembre 1918
69622 VILLEURBANNE cedex

Tel: 33 04 26 23 44 70

Email

Ingénieur de recherche CNRS

Publications

Display of 1 to 30 publications on 36 in total

Neural Networks beyond explainability: Selective inference for sequence motifs

Antoine Villié, Philippe Veber, Yohann de Castro, Laurent Jacob

Preprint

see the publication

Detecting adaptive convergent amino acid evolution

Carine Rey, Vincent Lanore, Philippe Veber, Laurent Guéguen, Nicolas Lartillot, Marie Sémon...

Philosophical Transactions of the Royal Society B: Biological Sciences . 374 ( 1777 ) : 1-11

DOI: 10.1098/rstb.2018.0234

Journal article

see the publication

MOSAIC : une plate-forme web pour l’analyse statistique des données d’écotoxicologie. Fiche Thématique N°13

Sandrine Charles, Virgile Baudrot, Philippe Veber

: 4 p.

see the publication

Response to Comment on "Robust Fit of Toxicokinetic-Toxicodynamic Models Using Prior Knowledge Contained in the Design of Survival Toxicity Tests

Marie Laure Delignette-Muller, P. Veber

Environmental Science and Technology . 51 : 8202-8203

DOI: 10.1021/acs.est.7b02548

Journal article

see the publication

Robust Fit of Toxicokinetic-Toxicodynamic Models Using Prior Knowledge Contained in the Design of Survival Toxicity Tests

Marie Laure Delignette-Muller, P. Ruiz, P. Veber

Environmental Science and Technology . 51 : 4038-4045

DOI: 10.1021/acs.est.6b05326

Journal article

see the publication

MaxTiC: Fast Ranking Of A Phylogenetic Tree By Maximum Time Consistency With Lateral Gene Transfers

Cédric Chauve, Akbar A Rafiey, Adrian A Davin, Celine Scornavacca, Philippe Veber, Bastien Boussau...

DOI: 10.1101/127548

Other publication

see the publication

Quantitative Molecular Detection of 19 Major Pathogens in the Interdental Biofilm of Periodontally Healthy Young Adults

Florence Carrouel, Stéphane Viennot, Julie Santamaria, Philippe Veber, Denis Bourgeois

Frontiers in Microbiology . 7 : 840 - 840

DOI: 10.3389/fmicb.2016.00840

Journal article

see the publication

RAR/RXR binding dynamics distinguish pluripotency from differentiation associated cis-regulatory elements

Amandine Chatagnon, Philippe Veber, Valérie Morin, Justin Bedő,, Gérard Triqueneaux, Marie Sémon...

Nucleic Acids Research . 43 ( 10 ) : 4833--4854

DOI: 10.1093/nar/gkv370

Journal article

see the publication

Host plant specialization matters in the epidemiology of Wolbachia across phytophagous wasps (Hymenoptera: Torymidae)

Thomas Boivin, Hélène Henri, Fabrice Vavre, Cindy Gidoin, Philippe Veber, Jean-Noël Candau...

8. International Wolbachia Conference . : np

Poster

see the publication

Statistical handling of reproduction data for exposure-response modeling

Marie Laure Delignette-Muller, Christelle Lopes, Philippe Veber, Sandrine Charles

Environmental Science and Technology . 48 : 7544-51

DOI: 10.1021/es502009r

Journal article

see the publication

Epidemiology of asexuality induced by the endosymbiotic Wolbachia across phytophagous wasp species: host plant specialization matters.

Thomas Boivin, Hélène Henri, Fabrice Vavre, Cindy Gidoin, Philippe Veber, Jean-Noël Candau...

Molecular Ecology Notes . 23 ( 9 ) : 2362-2375

DOI: 10.1111/mec.12737

Journal article

see the publication

BioNLP Shared Task - The Bacteria Track

Robert Bossy, Julien Jourde, Alain-Pierre Manine, Philippe Veber, Erick Alphonse, Maarten van de Guchte...

BMC Bioinformatics . 13 : np

DOI: 10.1186/1471-2105-13-S11-S3

Journal article

see the publication

BioNLP Shared Task 2011 - Bacteria Gene Interactions and Renaming

Julien Jourde, Alain-Pierre Manine, Philippe Veber, Karen Fort, Robert Bossy, Erick Alphonse...

Proceedings of the BioNLP Shared Task 2011 ACL Workshop . 13 9781937284091 : 65-73

Conference paper

see the publication

Repair and Prediction (under Inconsistency) in Large Biological Networks with Answer Set Programming

Martin Gebser, Carito Guziolowski, Mihail Ivanchev, Torsten Schaub, Anne Siegel, Philippe Veber...

Principles of Knowledge Representation and Reasoning .

Conference paper

see the publication

Lagrangian approaches for a class of matching problems in computational biology

Nicola Yanev, Rumen Andonov, Philippe Veber, Stefan Balev

Computers & Mathematics with Applications . 55 ( Issue 5 (March 2008) ) : 1054-1067

DOI: 10.1016/j.camwa.2006.12.103

Journal article

see the publication

Inferring the role of transcription factors in regulatory networks

Philippe Veber, Carito Guziolowski, Michel Le Borgne, Ovidiu Radulescu, Anne Siegel

BMC Bioinformatics . 9 : nc

DOI: 10.1186/1471-2105-9-228

Journal article

see the publication

Détection de domaines dans des séquences génomiques : un problème de couverture optimale

Philippe Veber, Sébastien Tempel, Rumen Andonov, Dominique Lavenier, Jacques Nicolas

FRANCORO V/ROADEF 2007 .

Conference paper

see the publication

Decision Diagrams for Qualitative Biological Models

Michel Le Borgne, Philippe Veber

: 17

Report

see the publication

Checking Consistency Between Expression Data and Large Scale Regulatory Networks: A Case Study

Carito Guziolowski, Philippe Veber, Michel Le Borgne, Ovidiu Radulescu, Anne Siegel

: 14

Report

see the publication

Inferring the role of transcription factors in regulatory networks

Philippe Veber, Carito Guziolowski, Michel Le Borgne, Ovidiu Radulescu, Anne Siegel

Report

see the publication

Optimiser un plan d'expérience à partir de modèles qualitatifs?

Anne Siegel, Carito Guziolowski, Philippe Veber, Ovidiu Radulescu, Michel Le Borgne

Biofutur . 275 : 27-31

Journal article

see the publication

Modélisation grande échelle de réseaux biologiques : vérification par contraintes booléennes de la cohérence des données

Philippe Veber

Thesis

see the publication

Qualitative response of interaction networks: application to the validation of biological models

Anne Siegel, Carito Guziolowski, Philippe Veber, Ovidiu Radulescu, Michel Le Borgne

6th International Congress on Industrial and Applied Mathematics. ICIAM 07 . : nc

Conference paper

see the publication

Checking Consistency Between Expression Data and Large Scale Regulatory Networks: A Case Study

Carito Guziolowski, Philippe Veber, Michel Le Borgne, Ovidiu Radulescu, Anne Siegel

Journal of Biological Physics and Chemistry . 7 : 37-43

Journal article

see the publication

Path-equivalent developments in acyclic weighted automata

Mathieu Giraud, Philippe Veber, Dominique Lavenier

International Journal of Foundations of Computer Science . 18 ( 4 ) : 799-812

DOI: 10.1142/S012905410700498X

Journal article

see the publication

Qualitative analysis of the relation between DNA microarray data and behavioral models of regulation networks

Anne Siegel, Ovidiu Radulescu, Michel Le Borgne, Philippe Veber, Julien Ouy, Sandrine Lagarrigue

BioSystems . 84 : 153-174

Journal article

see the publication

Lagrangian Approaches for a class of Matching Problems in Computational Biology

Nicola Yanev, Rumen Andonov, Philippe Veber, Stefan Balev

: 18

Report

see the publication

Qualitative, integrated modeling of lipid metabolism in hepatocytes

O Radulescu, A Siegel, Mathieu Le Borgne, Philippe Veber, E Pécou, Sandrine Lagarrigue...

7th International Conference on Systems Biology - Yokohama . : Inconnu

Poster

see the publication