Pôles techniques

BioNLP Shared Task 2011 - Bacteria Gene Interactions and Renaming

Julien Jourde, Alain-Pierre Manine, Philippe Veber, Karen Fort, Robert Bossy, Erick Alphonse...

Proceedings of the BioNLP Shared Task 2011 ACL Workshop . 13 9781937284091 : 65-73

2011

Acte de congrès

voir la publication

Utilisation de grilles de calcul pour la génomique comparative

Simon Penel, Christophe Blanchet, Pascal Calvat, Yonny Cardenas, Clement Gauthey, Jean Yves Nief...

Rencontres Scientifiques France Grilles 2011 .

2011

Acte de congrès

voir la publication

Leanness of Lou/C rats does not require higher thermogenic capacity of brown adipose tissue

Maud Belouze, Sibille Brigitte, Benjamin Rey, Damien Roussel, Caroline Romestaing, Loïc Teulier...

Physiology & behavior . 104 ( 5 ) : 893-899

DOI: 10.1016/J.Physbeh.2011.05.029

2011

Article dans une revue

voir la publication

ReNaBi-GRISBI: grande infrastructure pour la bioinformatique

Christophe Blanchet, Clément Gauthey, Olivier Collin, Tiphaine Martin, Nouredine Melab, Frederic Plewniak...

JOBIM 2010 - Journées Ouvertes en Biologie, Informatique et Mathématiques .

2010

Acte de congrès

voir la publication

Transcriptome analysis in non-model species: a new method for the analysis of heterologous hybridization on microarrays

Cyril Dégletagne, Céline Keime, Benjamin Rey, Marc de Dinechin, Fabien Forcheron, Paul Chuchana...

BMC Genomics . 11 : 344

DOI: 10.1186/1471-2164-11-344

2010

Article dans une revue

voir la publication

Cold-acclimation-induced non-shivering thermogenesis in birds is associated with upregulation of avian UCP but not with innate uncoupling or altered ATP efficiency

L. Teulier, J.-L. Rouanet, D. Letexier, C. Romestaing, M. Belouze, B. Rey...

Journal of Experimental Biology . 213 : 2476-2482

DOI: 10.1242/jeb.043489

2010

Article dans une revue

voir la publication

Repair and Prediction (under Inconsistency) in Large Biological Networks with Answer Set Programming

Martin Gebser, Carito Guziolowski, Mihail Ivanchev, Torsten Schaub, Anne Siegel, Philippe Veber...

Principles of Knowledge Representation and Reasoning .

2010

Acte de congrès

voir la publication

Local adaptation and evolution of parasitoid interactions in an invasive species, Drosophila subobscura

Patricia Gibert, Roland Allemand, Hélène Henri, Raymond B Huey

Evolutionary Ecology Research . 12 : 873-883

2010

Article dans une revue

voir la publication

Clonal origin of emerging populations of Ehrlichia ruminantium in Burkina Faso

Hassane Adakal, Laurent Gavotte, Frederic Stachurski, Maurice Konkobo, Hélène Henri, Sébastien Zoungrana...

Infection, Genetics and Evolution . 10 ( 7 ) : 903-912

DOI: 10.1016/j.meegid.2010.05.011

2010

Article dans une revue

voir la publication

Genetic structure and linkage disequilibrium in 4 Vitis species

Stephane Nicolas, Jean-Pierre Peros, Patrice P. This, Thierry Lacombe, Valerie V. Laucou, Loic L. Le Cunff...

Grapevine breeding and genetics .

2010

Poster

voir la publication

Genetic structure and linkage disequilibrium in four Vitis species

Stephane Nicolas, Jean-Pierre Peros, Patrice P. This, Thierry Lacombe, L. Le Cunff, Jean-Michel Boursiquot...

10. International Conference on Grapevine Breeding and Genetics .

2010

Acte de congrès

voir la publication

Tissue variation of mitochondrial oxidative phosphorylation efficiency in cold-acclimated ducklings

Karine Salin, Loïc Teulier, Benjamin Rey, Jean-Louis Rouanet, Yann Voituron, Claude H. B. Duchamp...

Acta Biochimica Polonica . 57 ( 4 ) : 409-412

2010

Article dans une revue

voir la publication

Up-regulation of avian uncoupling protein in cold-acclimated and hyperthyroid ducklings prevents reactive oxygen species production by skeletal muscle mitochondria

B. Rey, D. Roussel, P. Romestaing, M. Belouze, J.-L. Rouanet, D. Desplanches...

BMC Physiology . 10(5) : 1-12

2010

Article dans une revue

voir la publication

Oxygen recovery up-regulates avian UCP and ANT in newly hatched ducklings

B. Rey, M. Spée, M. Belouze, A. Girard, Jacques Prost, D. Roussel...

Journal of Comparative Physiology B-Biochemical systemic and environmental physiology . 180(2) : 239-246

2010

Article dans une revue

voir la publication

Genetic structure and linkage disequilibrium in 4 species of the Vitis genus

Patrice P. This, Stephane Nicolas, Alexis Dereeper, Agnès Doligez, Jean-Pierre Peros, Roberto Bacilieri...

Génoplante .

2010

Poster

voir la publication

A new case of Wolbachia dependence in the genus Asobara: evidence for parthenogenesis induction in Asobara japonica

N. Kremer, D. Charif, H. Henri, M. Bataille, G. Prévost, K. Kraaijeveld...

Heredity . 103 ( 3 ) : 248-256

DOI: 10.1038/hdy.2009.63

2009

Article dans une revue

voir la publication

Genomic environment influences the dynamics of the tirant LTR retrotransposon in Drosophila.

Marie Fablet, Emmanuelle Lerat, Rita Rebollo, Béatrice Horard, Nelly Burlet, Sonia Martinez...

FASEB Journal . 23 ( 5 ) : 1482-9

DOI: 10.1096/fj.08-123513

2009

Article dans une revue

voir la publication

Molecular Detection Penetrance and Transmission of an Inherited Virus Responsible for Behavioral Manipulation of an Insect Parasitoid

S. Patot, D. Lepetit, D. Charif, Julien Varaldi, Frédéric Fleury

Applied and Environmental Microbiology . 75 ( 3 ) : 703-710

DOI: 10.1128/AEM.01778-08

2009

Article dans une revue

voir la publication

Interactions between Coexisting Intracellular Genomes: Mitochondrial Density and Wolbachia Infection

L. Mouton, H. Henri, Frédéric Fleury

Applied and Environmental Microbiology . 75(7) : 1916-1921

2009

Article dans une revue

voir la publication

VirHostNet : a knowledge base for the management and the analysis of proteome-wide virus-host interaction networks

Vincent Navratil, Benoit de Chassey, Laurène Meyniel, Stephane Delmotte, Christian Gautier, Patrice André...

Nucleic Acids Research . 37 : D661-D668

DOI: 10.1093/nar/gkn794

2009

Article dans une revue

voir la publication

Databases of Homologous Gene Families for Comparative Genomics

Simon Penel, Anne-Muriel Arigon Chifolleau, Jean-François Dufayard, Anne-Sophie Sertier, Vincent Daubin, L. Duret...

BMC Bioinformatics . 10 (Suppl.6) :S3 : 13

DOI: 10.1186/1471-2105-10-S6-S3

2009

Article dans une revue

voir la publication

What shapes intra-specific variation in home range size? A case study of female roe deer

Sonia Said, Jean-Michel Gaillard, Olivier Widmer, François Débias, G. Bourgoin, Daniel Delorme...

Oikos . 118 : 1299-1306

DOI: 10.1111/j.1600-0706.2009.17346.x

2009

Article dans une revue

voir la publication

Mitochondrial adaptations to steatohepatitis induced by a methionine- and choline-deficient diet

C. Romestaing, M.A. Piquet, D. Letexier, B. Rey, A. Mourier, S. Servais...

AJP - Endocrinology and Metabolism . 294 ( (1) ) : E110-E119

2008

Article dans une revue

voir la publication

Reptilian uncoupling protein: functionality and expression in sub-zero temperatures

B. Rey, B. Sibille, C. Romestaing, M. Belouze, D. Letexier, S. Servais...

Journal of Experimental Biology . 211 : 1456-1462

2008

Article dans une revue

voir la publication

Recovery from swimming-induced hypothermia in king penguins: effects of nutritional condition.

L. G. Halsey, Y. Handrich, B. Rey, A. Fahlman, A. J. Woakes, P. J. Butler

Physiological and Biochemical Zoology . 81 ( 4 ) : 434-441

DOI: 10.1086/589546

2008

Article dans une revue

voir la publication

Remote access to ACNUC nucleotide and protein sequence databases at PBIL

Manolo Gouy, Stephane Delmotte

Biochimie . 90 ( 4 ) : 555-562

DOI: 10.1016/j.biochi.2007.07.003

2008

Article dans une revue

voir la publication

DigiPINS: A database for vertebrate exonic single nucleotide polymorphisms and its application to cancer association studies

Vincent Navratil, Simon Penel, Stephane Delmotte, Dominique Mouchiroud, Christian Gautier, Abdel Aouacheria

Biochimie . 90 ( 4 ) : 563-569

DOI: 10.1016/j.biochi.2007.09.017

2008

Article dans une revue

voir la publication

DigiPINS: a database for vertebrate exonic single nucleotide polymorphisms and its application to cancer association studies.

V. Navratil, Simon Penel, Sebastien Delmotte, D. Mouchiroud, Christian Gautier, A. Aouacheria

Biochimie . xxx : 563-569

2008

Article dans une revue

voir la publication

Lagrangian approaches for a class of matching problems in computational biology

Nicola Yanev, Rumen Andonov, Philippe Veber, Stefan Balev

Computers & Mathematics with Applications . 55 ( Issue 5 (March 2008) ) : 1054-1067

DOI: 10.1016/j.camwa.2006.12.103

2008

Article dans une revue

voir la publication

Inferring the role of transcription factors in regulatory networks

Philippe Veber, Carito Guziolowski, Michel Le Borgne, Ovidiu Radulescu, Anne Siegel

BMC Bioinformatics . 9 : nc

DOI: 10.1186/1471-2105-9-228

2008

Article dans une revue

voir la publication

Pôles techniques

Pôle informatique

Pôle biotechnologique

Pôle administratif

Entretien des locaux

Publications

BioNLP Shared Task 2011 - Bacteria Gene Interactions and Renaming

Utilisation de grilles de calcul pour la génomique comparative

Leanness of Lou/C rats does not require higher thermogenic capacity of brown adipose tissue

ReNaBi-GRISBI: grande infrastructure pour la bioinformatique

Transcriptome analysis in non-model species: a new method for the analysis of heterologous hybridization on microarrays

Cold-acclimation-induced non-shivering thermogenesis in birds is associated with upregulation of avian UCP but not with innate uncoupling or altered ATP efficiency

Repair and Prediction (under Inconsistency) in Large Biological Networks with Answer Set Programming

Local adaptation and evolution of parasitoid interactions in an invasive species, Drosophila subobscura

Clonal origin of emerging populations of Ehrlichia ruminantium in Burkina Faso

Genetic structure and linkage disequilibrium in 4 Vitis species

Genetic structure and linkage disequilibrium in four Vitis species

Tissue variation of mitochondrial oxidative phosphorylation efficiency in cold-acclimated ducklings

Up-regulation of avian uncoupling protein in cold-acclimated and hyperthyroid ducklings prevents reactive oxygen species production by skeletal muscle mitochondria

Oxygen recovery up-regulates avian UCP and ANT in newly hatched ducklings

Genetic structure and linkage disequilibrium in 4 species of the Vitis genus

A new case of Wolbachia dependence in the genus Asobara: evidence for parthenogenesis induction in Asobara japonica

Genomic environment influences the dynamics of the tirant LTR retrotransposon in Drosophila.

Molecular Detection Penetrance and Transmission of an Inherited Virus Responsible for Behavioral Manipulation of an Insect Parasitoid

Interactions between Coexisting Intracellular Genomes: Mitochondrial Density and Wolbachia Infection

VirHostNet : a knowledge base for the management and the analysis of proteome-wide virus-host interaction networks

Databases of Homologous Gene Families for Comparative Genomics

What shapes intra-specific variation in home range size? A case study of female roe deer

Mitochondrial adaptations to steatohepatitis induced by a methionine- and choline-deficient diet

Reptilian uncoupling protein: functionality and expression in sub-zero temperatures

Recovery from swimming-induced hypothermia in king penguins: effects of nutritional condition.

Remote access to ACNUC nucleotide and protein sequence databases at PBIL

DigiPINS: A database for vertebrate exonic single nucleotide polymorphisms and its application to cancer association studies

DigiPINS: a database for vertebrate exonic single nucleotide polymorphisms and its application to cancer association studies.

Lagrangian approaches for a class of matching problems in computational biology

Inferring the role of transcription factors in regulatory networks