
GECO Evolutionary and Computational Genomics
Bioinformatics, Phylogeny and Evolutionary Genomics Group
Lartillot Nicolas
Directeur de recherche
CNRS
Publications
Display of 1 to 30 publications on 68 in total
Genes and sites under adaptation at the phylogenetic scale also exhibit adaptation at the population-genetic scale
Preprint
see the publicationAn Improved Codon Modeling Approach for Accurate Estimation of the Mutation Bias
Molecular Biology and Evolution . 39
Journal article
see the publicationIdentifying the best approximating model in Bayesian phylogenetics: Bayes factors, cross-validation or wAIC?
Preprint
see the publicationNatural Selection beyond Life? A Workshop Report
Life . 11 ( 10 ) : 1051
DOI: 10.3390/life11101051
Journal article
see the publicationQuantifying the impact of changes in effective population size and expression level on the rate of coding sequence evolution
Theoretical Population Biology . 142 : 57-66
Journal article
see the publicationInferring Long-Term Effective Population Size with Mutation–Selection Models
Molecular Biology and Evolution . 38 ( 10 ) : 4573-4587
Journal article
see the publicationLong-Lived Species of Bivalves Exhibit Low MT-DNA Substitution Rates
Frontiers in Molecular Biosciences . 8
Journal article
see the publicationReconstruction of body mass evolution in the Cetartiodactyla and mammals using phylogenomic data.
Peer Community Journal . 1 : e42
Journal article
see the publicationA Bayesian Mutation–Selection Framework for Detecting Site-Specific Adaptive Evolution in Protein-Coding Genes
Molecular Biology and Evolution . 38 ( 3 ) : 1199-1208
Journal article
see the publicationUniversal probabilistic programming offers a powerful approach to statistical phylogenetics
Communications Biology . 4 ( 1 )
Journal article
see the publicationReconstructing the History of Variation in Effective Population Size along Phylogenies
Genome Biology and Evolution . 13 ( 8 )
DOI: 10.1093/gbe/evab150
Journal article
see the publicationScalable Empirical Mixture Models That Account for Across-Site Compositional Heterogeneity
Molecular Biology and Evolution . 37 : 3616 - 3631
Journal article
see the publicationDetecting sex-linked genes using genotyped individuals sampled in natural populations
Preprint
see the publicationThe Bayesian Approach to Molecular Phylogeny
Phylogenetics in the Genomic Era . : 1.4:1--1.4:17
Book chapter
see the publicationPhyloBayes: Bayesian Phylogenetics Using Site-heterogeneous Models
Phylogenetics in the Genomic Era . : 1.5:1--1.5:16
Book chapter
see the publicationProbabilistic programming: a powerful new approach to statistical phylogenetics
Preprint
see the publicationFitting diversification models on undated or partially dated trees
Peer Community in Evolutionary Biology . : 100088
Other publication
see the publicationDetecting adaptive convergent amino acid evolution
Philosophical Transactions of the Royal Society B: Biological Sciences . 374 ( 1777 ) : 1-11
Journal article
see the publicationConditional Approximate Bayesian Computation: A New Approach for Across-Site Dependency in High-Dimensional Mutation–Selection Models
Molecular Biology and Evolution . 35 ( 11 ) : 2819-2834
Journal article
see the publicationLife History Traits Impact the Nuclear Rate of Substitution but Not the Mitochondrial Rate in Isopods
Molecular Biology and Evolution . 35 ( 12 ) : 2900-2912
Journal article
see the publicationThe Red Queen model of recombination hot-spot evolution: a theoretical investigation
Philosophical Transactions of the Royal Society B: Biological Sciences .
Journal article
see the publicationImproved Modeling of Compositional Heterogeneity Supports Sponges as Sister to All Other Animals
Current Biology - CB . 27 ( 24 ) : 3864-3870.e4
Journal article
see the publicationClosing the gap between rocks and clocks using total-evidence dating
Philosophical Transactions of the Royal Society B: Biological Sciences . 371 : 20150136
Journal article
see the publicationA mixed relaxed clock model
Philosophical Transactions of the Royal Society B: Biological Sciences . 371 : 20150132
Journal article
see the publicationReply to Halanych et al.
Proceedings of the National Academy of Sciences of the United States of America . 113 ( 8 ) : E948-E949
Journal article
see the publicationRevBayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language
Systematic Biology . 65 : 726-36
Journal article
see the publicationProbabilistic models of eukaryotic evolution: time for integration
Philosophical Transactions of the Royal Society B: Biological Sciences . 370 ( 1678 ) : 20140338
Journal article
see the publicationGenomic data do not support comb jellies as the sister group to all other animals
Proceedings of the National Academy of Sciences of the United States of America . 112 ( 50 ) : 15402-15407
Journal article
see the publication