Technical services

Computing services

Research assistance

Administrative services

Building maintenance

Publications

Display of 121 to 150 publications on 340 in total

Colib’read on galaxy: a tools suite dedicated to biological information extraction from raw NGS reads

Yvan Le Bras, Olivier Collin, Cyril Monjeaud, Vincent Lacroix, Eric Rivals, Claire Lemaitre...

GigaScience . 5 ( 1 )

DOI: 10.1186/s13742-015-0105-2

Journal article

see the publication

Quantitative Molecular Detection of 19 Major Pathogens in the Interdental Biofilm of Periodontally Healthy Young Adults

Florence Carrouel, Stéphane Viennot, Julie Santamaria, Philippe Veber, Denis Bourgeois

Frontiers in Microbiology . 7 : 840 - 840

DOI: 10.3389/fmicb.2016.00840

Journal article

see the publication

How Structured Is the Entangled Bank? The Surprisingly Simple Organization of Multiplex Ecological Networks Leads to Increased Persistence and Resilience

Sonia Kéfi, Vincent Miele, Evie Wieters, Sergio Navarrete, Eric Berlow

PLoS Biology . 14 ( 8 ) : e1002527

DOI: 10.1371/journal.pbio.1002527

Journal article

see the publication

Hormetic response triggers multifaceted anti-oxidant strategies in immature king penguins (Aptenodytes patagonicus)

Benjamin Rey, Cyril Dégletagne, Jacques Bodennec, Pierre-Axel Monternier, Mathieu Mortz, Damien Roussel...

Free Radical Biology and Medicine . 97 : 577–587

DOI: 10.1016/j.freeradbiomed.2016.07.015

Journal article

see the publication

Transcriptomic data analysis and differential gene expression of antioxidant pathways in king penguin juveniles (Aptenodytes patagonicus) before and after acclimatization to marine life

Benjamin Rey, Cyril Dégletagne, Claude Duchamp

Data in Brief . 9 : 549–555

DOI: 10.1016/j.dib.2016.09.021

Journal article

see the publication

Lipid-induced thermogenesis is up-regulated by the first cold-water immersions in juvenile penguins

Loïc Teulier, Benjamin Rey, Jérémy Tornos, Marion Le Coadic, Pierre-Axel Monternier, Aurore Bourguignon...

Journal of Comparative Physiology B . 186 : 639–650

DOI: 10.1007/s00360-016-0975-3

Journal article

see the publication

Factors associated with poor outcomes among adults hospitalised for influenza in France: A three-year prospective multicenter study

Paul Loubet, Nezha Samih-Lenzi, Florence Galtier, Philippe Vanhems, Pierre Loulergue, Xavier Duval...

Journal of Clinical Virology . 79 : 68–73

DOI: 10.1016/j.jcv.2016.04.005

Journal article

see the publication

Additional heritable virus in the parasitic wasp Leptopilina boulardi: prevalence, transmission and phenotypic effects

Julien Martinez, David Lepetit, Marc Ravallec, Frédéric Fleury, Julien Varaldi

Journal of General Virology . 97 : 523-535

DOI: 10.1099/jgv.0.000360

Journal article

see the publication

RiboDB database: a comprehensive resource for prokaryotic systematics

Frédéric Jauffrit, Simon Penel, Stéphane Delmotte, Carine Rey, Damien M de Vienne, Manolo Gouy...

Molecular Biology and Evolution . 33 ( 8 ) : 2170--2172

DOI: 10.1093/molbev/msw088

Journal article

see the publication

Influence of oxidative homeostasis on bacterial density and cost of infection in Drosophila–Wolbachia symbioses

David Monnin, Natacha Kremer, C. Berny, Hélène Henri, Adeline Dumet, Yann Voituron...

Journal of Evolutionary Biology . 29 : 1211-1222

DOI: 10.1111/jeb.12863

Journal article

see the publication

SNP calling from RNA-seq data without a reference genome: identification, quantification, differential analysis and impact on the protein sequence

Hélène Lopez-Maestre, Lilia Brinza, Camille Marchet, Janice Kielbassa, Sylvère Bastien, Mathilde Boutigny...

Nucleic Acids Research .

DOI: 10.1093/nar/gkw655

Journal article

see the publication

The draft genome sequence of the rice weevil Sitophilus oryzae as a model to explore the host-symbiont interactions in a nascent stage of endosymbiosis

Carlos Vargas-Chavez, Nicolas Parisot, Clément Goubert, Patrice Baa-Puyoulet, Severine Balmand, M. Boulesteix...

Journées Ouvertes Biologie Informatique Mathématiques (JOBIM) .

Poster

see the publication

Strong phylogenetic inertia on genome size and transposable element content among 26 species of flies

Camille Sessegolo, Nelly Burlet, Annabelle A. Haudry

Biology Letters . 12 ( 8 )

DOI: 10.1098/rsbl.2016.0407

Journal article

see the publication

Drosophila Females Undergo Genome Expansion after Interspecific Hybridization

Valèria Romero-Soriano, Nelly Burlet, Doris Vela, Antonio Fontdevila, Cristina Vieira, Maria Pilar Garciá Guerreiro

Genome Biology and Evolution . 8 ( 3 ) : 556-561

DOI: 10.1093/gbe/evw024

Journal article

see the publication

No Evidence That Nitrogen Limitation Influences the Elemental Composition of Isopod Transcriptomes and Proteomes

Clémentine François, L. Duret, Laurent Simon, Florian Mermillod-Blondin, Florian Malard, Lara Konecny-Dupré...

Molecular Biology and Evolution . 33 ( 10 ) : 2605–2620

DOI: 10.1093/molbev/msw131

Journal article

see the publication

Beneficial effects of group size on oxidative balance in a wild cooperative breeder

Sophie Lardy, Benjamin Rey, Karine Salin, Yann Voituron, Aurélie Cohas

Behavioral Ecology . 27 ( 6 ) : 1820–1825

DOI: 10.1093/beheco/arw114

Journal article

see the publication

Calcul parallèle avec R

Vincent Miele, Violaine Louvet

978-2-7598-2060-3

Book

see the publication

RAR/RXR binding dynamics distinguish pluripotency from differentiation associated cis-regulatory elements

Amandine Chatagnon, Philippe Veber, Valérie Morin, Justin Bedő,, Gérard Triqueneaux, Marie Sémon...

Nucleic Acids Research . 43 ( 10 ) : 4833--4854

DOI: 10.1093/nar/gkv370

Journal article

see the publication

DNA Physical Properties and Nucleosome Positions Are Major Determinants of HIV-1 Integrase Selectivity

Monica Naughtin, Zofia Haftek-Terreau, Johan Xavier, Sam Meyer, Maud Silvain, Yan Jaszczyszyn...

PLoS ONE . 10 : e0129427

DOI: 10.1371/journal.pone.0129427

Journal article

see the publication

Two Host Clades, Two Bacterial Arsenals: Evolution through Gene Losses in Facultative Endosymbionts.

Pierre-Antoine Rollat-Farnier, Diego Santos-Garcia, Qiong Rao, Marie-France Sagot, Francisco J Silva, Hélène Henri...

Genome Biology and Evolution . 7 ( 3 ) : 839-855

DOI: 10.1093/gbe/evv030

Journal article

see the publication

Oxidative phosphorylation efficiency, proton conductance and reactive oxygen species production of liver mitochondria correlates with body mass in frogs

Damien Roussel, Karine Salin, Adeline Dumet, Caroline Romestaing, Benjamin Rey, Yann Voituron

Journal of Experimental Biology . 218 : 3222-3228

DOI: 10.1242/jeb.126086

Journal article

see the publication

Detection of genetically isolated entities within the Mediterranean species of Bemisia tabaci: new insights into the systematics of this worldwide pest

Laurence Mouton, Olivier Gnankiné, Hélène Henri, Gabriel Terraz, Guillaume Ketoh, Thibaud Martin...

Pest Management Science . 71 ( 3 ) : 452-458

DOI: 10.1002/ps.3834

Journal article

see the publication

Revisiting the link between breeding effort and oxidative balance through field evaluation of two sympatric sibling insect species

Benjamin Rey, Pierre-François Pélisson, Marie-Claude Bel-Venner, Yann Voituron, Samuel Venner

Evolution - International Journal of Organic Evolution . 69 ( 3 ) : 815–822

DOI: 10.1111/evo.12586

Journal article

see the publication

Résilience systémique d’un territoire composé d’activités essentielles suite à une perturbation majeure – Approches systémique et spatiale

Benjamin Rey

Thesis

see the publication

Estimating resting metabolic rate by biologging core and subcutaneous temperature in a mammal

Benjamin Rey, Lewis G Halsey, Robin Hetem, Andrea Fuller, Duncan Mitchell, Jean-Louis Rouanet

Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology . 183 : 72–77

DOI: 10.1016/j.cbpa.2015.01.012

Journal article

see the publication

Unknown age in health disorders: A method to account for its cumulative effect and an application to feline viruses interactions.

Eléonore Hellard, Dominique Pontier, Aurélie Siberchicot, Frank Sauvage, David Fouchet

Epidemics . 11 : 48-55

DOI: 10.1016/j.epidem.2015.02.004

Journal article

see the publication

Spodoptera frugiperda (Lepidoptera: Noctuidae) host-plant variants: two host strains or two distinct species?

Pascaline Dumas, Fabrice Legeai, Claire Lemaitre, Erwan Scaon, Marion Orsucci, Karine Labadie...

Genetica . 143 ( 3 ) : 305-316

DOI: 10.1007/s10709-015-9829-2

Journal article

see the publication

Optimization of multiplexed RADseq libraries using low-cost adaptors

Hélène Henri, Marie Cariou, Gabriel Terraz, Sonia Martinez, Adil El Filali, Marine Veyssière...

Genetica . 143 ( 2 ) : 139-143

DOI: 10.1007/s10709-015-9828-3

Journal article

see the publication

Combining High-Resolution Contact Data with Virological Data to Investigate Influenza Transmission in a Tertiary Care Hospital

Nicolas Voirin, Cécile Payet, Alain Barrat, Ciro Cattuto, Nagham Khanafer, Corinne Régis...

Infection Control and Hospital Epidemiology . 36 ( 3 ) : 254

DOI: 10.1017/ice.2014.53

Journal article

see the publication

Determining the instar of a weevil larva (Coleoptera: Curculionidae) using a parsimonious method

A. Merville, A. Vallier, Samuel Venner, A. Siberchicot, D. Fouchet, A. Heddi...

European Journal of Entomology . 111 ( 4 ) : 567-573

DOI: 10.14411/eje.2014.056

Journal article

see the publication