Pôles techniques

Development of a PCR-RFLP assay to identify Drosophila melanogaster among field-collected larvae

Vincent Raquin, Hélène Henri, Marine Vallat, François Leulier, Patricia Gibert, Natacha Kremer

Ecology and Evolution . 8 ( 20 ) : 10067 - 10074

DOI: 10.1002/ece3.4453

2018

Article dans une revue

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Persistent Interactions with Bacterial Symbionts Direct Mature-Host Cell Morphology and Gene Expression in the Squid-Vibrio Symbiosis

Natacha Kremer, Eric Koch, Adil El Filali, Lawrence Zhou, Elizabeth Heath-Heckman, Edward Ruby...

mSystems . 3 ( 5 )

DOI: 10.1128/mSystems.00165-18

2018

Article dans une revue

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Evaluating the essentiality of the primary endosymbiont of the rice weevil Sitophilus oryzae through genome analysis

Carlos Vargas-Chavez, Nicolas Parisot, C. Goubert, Patrice Baa-Puyoulet, Severine Balmand, M. Boulesteix...

VI Meeting of the Spanish Society for Evolutionary Biology (SESBE) .

2018

Poster

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Immunosenescence patterns in two populations of a long-lived mammal.

Louise Cheynel, Jean-Michel Gaillard, B. Rey, Emmanuelle Gilot-Fromont, Jean-François Lemaître

Réunion du groupe Immuno-écologie du Réseau Ecologie des Interactions Durables .

2017

Acte de congrès

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Introduction à R et au tidyverse

Julien Barnier

2017

Ouvrage

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MareyMap online: A user-friendly web application and database service for estimating recombination rates using physical and genetic maps

Aurélie Siberchicot, Adrien Bessy, Laurent Gueguen, Gabriel A. B. Marais

Genome Biology and Evolution . 9 ( 10 ) : 2506-2509

DOI: 10.1093/gbe/evx178

2017

Article dans une revue

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Immunosenescence patterns differ between populations but not between sexes in a long-lived mammal

Louise Cheynel, Jean-François Lemaître, Jean-Michel Gaillard, Benjamin Rey, G. Bourgoin, Hubert Ferté...

Scientific Reports . 7 ( 1 )

DOI: 10.1038/s41598-017-13686-5

2017

Article dans une revue

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Genome sequencing of the behaviour manipulating virus LbFV reveals a possible new virus family

D. Lepetit, B. Gillet, S. Hughes, K. Kraaijeveld, Julien Varaldi

Genome Biology and Evolution . 8 : 3718-3738

DOI: 10.1093/gbe/evw277

2017

Article dans une revue

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adegraphics: An S4 Lattice-Based Package for the Representation of Multivariate Data

Aurélie Siberchicot, A. Julien-Laferrière, Ab. Dufour, J. Thioulouse, S. Dray

The R Journal . 9 ( 2 ) : 198-212

DOI: 10.32614/RJ-2017-042

2017

Article dans une revue

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Response to Comment on "Robust Fit of Toxicokinetic-Toxicodynamic Models Using Prior Knowledge Contained in the Design of Survival Toxicity Tests

Marie Laure Delignette-Muller, P. Veber

Environmental Science and Technology . 51 : 8202-8203

DOI: 10.1021/acs.est.7b02548

2017

Article dans une revue

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Robust Fit of Toxicokinetic-Toxicodynamic Models Using Prior Knowledge Contained in the Design of Survival Toxicity Tests

Marie Laure Delignette-Muller, P. Ruiz, P. Veber

Environmental Science and Technology . 51 : 4038-4045

DOI: 10.1021/acs.est.6b05326

2017

Article dans une revue

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High-Throughput Sequencing of Transposable Element Insertions Suggests Adaptive Evolution of the Invasive Asian Tiger Mosquito Towards Temperate Environments

Clément Goubert, Hélène Henri, Guillaume Minard, Claire Valiente Moro, Patrick Mavingui, Cristina Vieira...

Molecular Ecology . 26 ( 15 ) : 1-14

DOI: 10.1111/mec.14184

2017

Article dans une revue

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Maternal age affects offspring nutrient dynamics

Doriane Muller, David Giron, Emmanuel Desouhant, Benjamin Rey, Jérome Casas, Nicolas Lefrique...

Journal of Insect Physiology . 101 : 123 - 131

DOI: 10.1016/j.jinsphys.2017.07.011

2017

Article dans une revue

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Age-dependent associations between telomere length and environmental conditions in roe deer

Rachael V Wilbourn, Hannah Froy, Marie-Christina Mcmanus, Louise Cheynel, Jean-Michel Gaillard, Emmanuelle Gilot-Fromont...

Biology Letters . 13 ( 9 ) : 20170434

DOI: 10.1098/rsbl.2017.0434

2017

Article dans une revue

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Uncoupling effect of palmitate is exacerbated in skeletal muscle mitochondria of sea-acclimatized king penguins (Aptenodytes patagonicus)

Benjamin Rey, Claude H. B. Duchamp, Damien Roussel

Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology . 211 : 56-60

DOI: 10.1016/j.cbpa.2017.06.009

2017

Article dans une revue

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Ancestral Genome Estimation Reveals the History of Ecological Diversification in Agrobacterium

Florent Lassalle, Rémi Planel, Simon Penel, David Chapulliot, Valérie Barbe, Audrey Dubost...

Genome Biology and Evolution . 9 ( 12 ) : 3413 - 3431

DOI: 10.1093/gbe/evx255

2017

Article dans une revue

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MaxTiC: Fast Ranking Of A Phylogenetic Tree By Maximum Time Consistency With Lateral Gene Transfers

Cédric Chauve, Akbar A Rafiey, Adrian A Davin, Celine Scornavacca, Philippe Veber, Bastien Boussau...

DOI: 10.1101/127548

2017

Autre publication

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Identification of misexpressed genetic elements in hybrids between Drosophila-related species

Hélène Lopez-Maestre, Elias Alberto Gutierrez Carnelossi, Vincent Lacroix, Nelly Burlet, Bruno Mugat, Séverine Chambeyron...

Scientific Reports . 7 : 40618

DOI: 10.1038/srep40618

2017

Article dans une revue

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Microchip transponder thermometry for monitoring core body temperature of antelope during capture

B. Rey, A. Fuller, R. S. Hetem, H. M. Lease, D. Mitchell, L. C. Meyer

Journal of Thermal Biology . 55 : 47-53

DOI: 10.1016/j.jtherbio.2015.11.010

2016

Article dans une revue

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Les Ateliers Pratiques Numériques en SHS des laboratoires lyonnais

Julien Barnier, Séverine Gedzelman, Nicolas Genis, Emmanuelle Morlock, Hervé Parmentier, Samantha Saïdi

Forum Humanités Numériques et données ouvertes .

2016

Poster

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Influenza vaccine effectiveness among healthcare workers in comparison to hospitalized patients: A 2004-2009 case-test, negative-control, prospective study

Philippe Vanhems, Y. Baghdadi, S. Roche, T. Benet, C. Regis, B. Lina...

Human Vaccines & Immunotherapeutics . 12 : 485-90

DOI: 10.1080/21645515.2015.1079677

2016

Article dans une revue

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RéSo

Julien Barnier, M. Dalud-Vincent

2016

Logiciel

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Fruiting Strategies of Perennial Plants: A Resource Budget Model to Couple Mast Seeding to Pollination Efficiency and Resource Allocation Strategies

Samuel Venner, A. Siberchicot, P.F. Pélisson, E. Schermer, Marie-Claude Bel-Venner, M. Nicolas...

The American Naturalist . 188 ( 1 ) : 66-75

DOI: 10.1086/686684

2016

Article dans une revue

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Quantitative Molecular Detection of 19 Major Pathogens in the Interdental Biofilm of Periodontally Healthy Young Adults

Florence Carrouel, Stéphane Viennot, Julie Santamaria, Philippe Veber, Denis Bourgeois

Frontiers in Microbiology . 7 : 840 - 840

DOI: 10.3389/fmicb.2016.00840

2016

Article dans une revue

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Hormetic response triggers multifaceted anti-oxidant strategies in immature king penguins (Aptenodytes patagonicus)

Benjamin Rey, Cyril Dégletagne, Jacques Bodennec, Pierre-Axel Monternier, Mathieu Mortz, Damien Roussel...

Free Radical Biology and Medicine . 97 : 577–587

DOI: 10.1016/j.freeradbiomed.2016.07.015

2016

Article dans une revue

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Transcriptomic data analysis and differential gene expression of antioxidant pathways in king penguin juveniles (Aptenodytes patagonicus) before and after acclimatization to marine life

Benjamin Rey, Cyril Dégletagne, Claude Duchamp

Data in Brief . 9 : 549–555

DOI: 10.1016/j.dib.2016.09.021

2016

Article dans une revue

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Lipid-induced thermogenesis is up-regulated by the first cold-water immersions in juvenile penguins

Loïc Teulier, Benjamin Rey, Jérémy Tornos, Marion Le Coadic, Pierre-Axel Monternier, Aurore Bourguignon...

Journal of Comparative Physiology B . 186 : 639–650

DOI: 10.1007/s00360-016-0975-3

2016

Article dans une revue

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Factors associated with poor outcomes among adults hospitalised for influenza in France: A three-year prospective multicenter study

Paul Loubet, Nezha Samih-Lenzi, Florence Galtier, Philippe Vanhems, Pierre Loulergue, Xavier Duval...

Journal of Clinical Virology . 79 : 68–73

DOI: 10.1016/j.jcv.2016.04.005

2016

Article dans une revue

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Additional heritable virus in the parasitic wasp Leptopilina boulardi: prevalence, transmission and phenotypic effects

Julien Martinez, David Lepetit, Marc Ravallec, Frédéric Fleury, Julien Varaldi

Journal of General Virology . 97 : 523-535

DOI: 10.1099/jgv.0.000360

2016

Article dans une revue

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RiboDB database: a comprehensive resource for prokaryotic systematics

Frédéric Jauffrit, Simon Penel, Stéphane Delmotte, Carine Rey, Damien M de Vienne, Manolo Gouy...

Molecular Biology and Evolution . 33 ( 8 ) : 2170--2172

DOI: 10.1093/molbev/msw088

2016

Article dans une revue

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Pôles techniques

Pôle informatique

Pôle biotechnologique

Pôle administratif

Entretien des locaux

Publications

Development of a PCR-RFLP assay to identify Drosophila melanogaster among field-collected larvae

Persistent Interactions with Bacterial Symbionts Direct Mature-Host Cell Morphology and Gene Expression in the Squid-Vibrio Symbiosis

Evaluating the essentiality of the primary endosymbiont of the rice weevil Sitophilus oryzae through genome analysis

Immunosenescence patterns in two populations of a long-lived mammal.

Introduction à R et au tidyverse

MareyMap online: A user-friendly web application and database service for estimating recombination rates using physical and genetic maps

Immunosenescence patterns differ between populations but not between sexes in a long-lived mammal

Genome sequencing of the behaviour manipulating virus LbFV reveals a possible new virus family

adegraphics: An S4 Lattice-Based Package for the Representation of Multivariate Data

Response to Comment on "Robust Fit of Toxicokinetic-Toxicodynamic Models Using Prior Knowledge Contained in the Design of Survival Toxicity Tests

Robust Fit of Toxicokinetic-Toxicodynamic Models Using Prior Knowledge Contained in the Design of Survival Toxicity Tests

High-Throughput Sequencing of Transposable Element Insertions Suggests Adaptive Evolution of the Invasive Asian Tiger Mosquito Towards Temperate Environments

Maternal age affects offspring nutrient dynamics

Age-dependent associations between telomere length and environmental conditions in roe deer

Uncoupling effect of palmitate is exacerbated in skeletal muscle mitochondria of sea-acclimatized king penguins (Aptenodytes patagonicus)

Ancestral Genome Estimation Reveals the History of Ecological Diversification in Agrobacterium

MaxTiC: Fast Ranking Of A Phylogenetic Tree By Maximum Time Consistency With Lateral Gene Transfers

Identification of misexpressed genetic elements in hybrids between Drosophila-related species

Microchip transponder thermometry for monitoring core body temperature of antelope during capture

Les Ateliers Pratiques Numériques en SHS des laboratoires lyonnais

Influenza vaccine effectiveness among healthcare workers in comparison to hospitalized patients: A 2004-2009 case-test, negative-control, prospective study

RéSo

Fruiting Strategies of Perennial Plants: A Resource Budget Model to Couple Mast Seeding to Pollination Efficiency and Resource Allocation Strategies

Quantitative Molecular Detection of 19 Major Pathogens in the Interdental Biofilm of Periodontally Healthy Young Adults

Hormetic response triggers multifaceted anti-oxidant strategies in immature king penguins (Aptenodytes patagonicus)

Transcriptomic data analysis and differential gene expression of antioxidant pathways in king penguin juveniles (Aptenodytes patagonicus) before and after acclimatization to marine life

Lipid-induced thermogenesis is up-regulated by the first cold-water immersions in juvenile penguins

Factors associated with poor outcomes among adults hospitalised for influenza in France: A three-year prospective multicenter study

Additional heritable virus in the parasitic wasp Leptopilina boulardi: prevalence, transmission and phenotypic effects

RiboDB database: a comprehensive resource for prokaryotic systematics